Difference between revisions of "Ec-20 002090"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9527 RXN-9527] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-decanoyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Ec-20_002090 == * left end position: ** 2094070 * transcription direction: ** NEGATIVE * right end position: ** 2110895 * centisome position: ** 40.6...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9527 RXN-9527] ==
+
== Gene Ec-20_002090 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2094070
−
* common name:
+
* transcription direction:
−
** 3-oxo-decanoyl-[acyl-carrier protein] synthase
+
** NEGATIVE
−
** Beta-ketoacyl synthase, N-terminal
+
* right end position:
−
** Thiolase-like, subgroup
+
** 2110895
−
** beta-ketoacyl synthase, partial
+
* centisome position:
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** 40.61092   
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0023_0135
 +
** Esi0023_0135
 +
** Prd1
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.4.24.70-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[ACP]][c]
+
−
* With common name(s):
+
−
** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 an octanoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a 3-oxo-decanoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-12_000640]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-27_003480]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-12_000650]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-27_002090]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways  ==
+
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
−
** '''28''' reactions found over '''31''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=2094070}}
−
{{#set: common name=3-oxo-decanoyl-[acyl-carrier protein] synthase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: right end position=2110895}}
−
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: centisome position=40.61092    }}
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: common name=Esi_0023_0135|Esi0023_0135|Prd1}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: reaction associated=3.4.24.70-RXN}}
−
{{#set: ec number=EC-2.3.1.41}}
+
−
{{#set: gene associated=Ec-12_000640|Ec-27_003480|Ec-12_000650|Ec-27_002090}}
+
−
{{#set: in pathway=PWY-5971}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:00, 21 March 2018

Gene Ec-20_002090

  • left end position:
    • 2094070
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2110895
  • centisome position:
    • 40.61092
  • Synonym(s):
    • Esi_0023_0135
    • Esi0023_0135
    • Prd1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_002090&oldid=23752"