Difference between revisions of "PRPPAMIDOTRANS-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6906 PWY-6906] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** Class II glu...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6906 PWY-6906] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641]
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** REVERSIBLE
 
* common name:
 
* common name:
−
** chitin derivatives degradation
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** Class II glutamine amidotransferase domain
 +
** Amidophosphoribosyltransferase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.4.2.14 EC-2.4.2.14]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[PHOSACETYLGLUCOSAMINEMUT-RXN]]
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** 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''<=>''' 1 [[PRPP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLN]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-10_005030]]
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** 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 5-phospho-&beta;-D-ribosylamine[c] '''<=>''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 L-glutamine[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Ec-07_005050]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-6-P-DEAMIN-RXN GLUCOSAMINE-6-P-DEAMIN-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-KINASE-RXN GLUCOSAMINE-KINASE-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUCOSAMINE-KINASE-RXN N-ACETYLGLUCOSAMINE-KINASE-RXN]
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=NAG6PDEACET-RXN NAG6PDEACET-RXN]
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* Gene: [[Ec-02_005190]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12627 RXN-12627]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12629 RXN-12629]
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*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** '''5''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-641}}
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* RHEA:
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{{#set: common name=chitin derivatives degradation}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14905 14905]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: total reaction=7}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072]
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{{#set: completion rate=14.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P28173 P28173]
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** [http://www.uniprot.org/uniprot/P35433 P35433]
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** [http://www.uniprot.org/uniprot/Q06203 Q06203]
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** [http://www.uniprot.org/uniprot/O29388 O29388]
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** [http://www.uniprot.org/uniprot/O67236 O67236]
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** [http://www.uniprot.org/uniprot/P65829 P65829]
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** [http://www.uniprot.org/uniprot/O57979 O57979]
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** [http://www.uniprot.org/uniprot/Q9X0X4 Q9X0X4]
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** [http://www.uniprot.org/uniprot/Q9RXT6 Q9RXT6]
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** [http://www.uniprot.org/uniprot/Q9K0C4 Q9K0C4]
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** [http://www.uniprot.org/uniprot/Q9V253 Q9V253]
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** [http://www.uniprot.org/uniprot/Q9PIT3 Q9PIT3]
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** [http://www.uniprot.org/uniprot/Q57657 Q57657]
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** [http://www.uniprot.org/uniprot/Q9JVC9 Q9JVC9]
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** [http://www.uniprot.org/uniprot/O26742 O26742]
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** [http://www.uniprot.org/uniprot/P43854 P43854]
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** [http://www.uniprot.org/uniprot/P35853 P35853]
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** [http://www.uniprot.org/uniprot/P41390 P41390]
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** [http://www.uniprot.org/uniprot/Q27601 Q27601]
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** [http://www.uniprot.org/uniprot/Q38999 Q38999]
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** [http://www.uniprot.org/uniprot/P04046 P04046]
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** [http://www.uniprot.org/uniprot/Q55621 Q55621]
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** [http://www.uniprot.org/uniprot/Q55038 Q55038]
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** [http://www.uniprot.org/uniprot/Q9STG9 Q9STG9]
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** [http://www.uniprot.org/uniprot/Q9T0J5 Q9T0J5]
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** [http://www.uniprot.org/uniprot/P52418 P52418]
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** [http://www.uniprot.org/uniprot/P52419 P52419]
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** [http://www.uniprot.org/uniprot/Q22134 Q22134]
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** [http://www.uniprot.org/uniprot/Q9ZB05 Q9ZB05]
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** [http://www.uniprot.org/uniprot/P00497 P00497]
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** [http://www.uniprot.org/uniprot/P0AG16 P0AG16]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Class II glutamine amidotransferase domain}}
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{{#set: common name=Amidophosphoribosyltransferase}}
 +
{{#set: ec number=EC-2.4.2.14}}
 +
{{#set: gene associated=Ec-07_005050|Ec-02_005190}}
 +
{{#set: in pathway=PWY-6121|PWY-6122|PWY-7282|PWY-6277}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:00, 21 March 2018

Reaction PRPPAMIDOTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Class II glutamine amidotransferase domain
    • Amidophosphoribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 diphosphate[c] + 1 L-glutamate[c] + 1 5-phospho-β-D-ribosylamine[c] <=> 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 H2O[c] + 1 L-glutamine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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