Difference between revisions of "PHOSPHAGLYPSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10656 RXN-10656] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** CDP-diacylgl...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10656 RXN-10656] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
** [http://enzyme.expasy.org/EC/2.7.8.5 EC-2.7.8.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-hydroxy-cis-D7-tetraecenoyl-ACPs]][c] '''=>''' 1 [[Trans-D3-cis-D7-tetradecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[CMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxy cis &Delta;7-tetradecenoyl-[acp][c] '''=>''' 1 a trans-&Delta;3-cis-&Delta;7-tetradecenoyl-[acp][c] '''+''' 1 H2O[c]
+
** 1 a CDP-diacylglycerol[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''<=>''' 1 H+[c] '''+''' 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c] '''+''' 1 CMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-11_001460]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
+
* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-aragem]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: ec number=EC-4.2.1.59}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12593 12593]
−
{{#set: in pathway=PWY-6282}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01801 R01801]
−
{{#set: reconstruction tool=meneco}}
+
* UNIPROT:
−
{{#set: reconstruction source=added for gapfilling}}
+
** [http://www.uniprot.org/uniprot/Q9JTH1 Q9JTH1]
 +
** [http://www.uniprot.org/uniprot/P46322 P46322]
 +
** [http://www.uniprot.org/uniprot/P44528 P44528]
 +
** [http://www.uniprot.org/uniprot/P47360 P47360]
 +
** [http://www.uniprot.org/uniprot/Q9PNM7 Q9PNM7]
 +
** [http://www.uniprot.org/uniprot/O25660 O25660]
 +
** [http://www.uniprot.org/uniprot/O51663 O51663]
 +
** [http://www.uniprot.org/uniprot/O67908 O67908]
 +
** [http://www.uniprot.org/uniprot/Q49839 Q49839]
 +
** [http://www.uniprot.org/uniprot/P75520 P75520]
 +
** [http://www.uniprot.org/uniprot/P74372 P74372]
 +
** [http://www.uniprot.org/uniprot/Q48959 Q48959]
 +
** [http://www.uniprot.org/uniprot/P0ABF8 P0ABF8]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase}}
 +
{{#set: ec number=EC-2.7.8.5}}
 +
{{#set: gene associated=Ec-11_001460}}
 +
{{#set: in pathway=PWY0-1545|PWY-5269|PWY4FS-7|PWY-5668|PWY4FS-8}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:00, 21 March 2018

Reaction PHOSPHAGLYPSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1545, cardiolipin biosynthesis III: PWY0-1545
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5269, cardiolipin biosynthesis II: PWY-5269
    • 2 reactions found over 3 reactions in the full pathway
  • PWY4FS-7, phosphatidylglycerol biosynthesis I (plastidic): PWY4FS-7
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5668, cardiolipin biosynthesis I: PWY-5668
    • 2 reactions found over 3 reactions in the full pathway
  • PWY4FS-8, phosphatidylglycerol biosynthesis II (non-plastidic): PWY4FS-8
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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