Difference between revisions of "Ec-11 005600"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAMIN-PYROPHOSPHOKINASE-RXN THIAMIN-PYROPHOSPHOKINASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Gene == Gene Ec-11_005600 == * left end position: ** 5573462 * transcription direction: ** POSITIVE * right end position: ** 5576081 * centisome position: ** 88.6...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAMIN-PYROPHOSPHOKINASE-RXN THIAMIN-PYROPHOSPHOKINASE-RXN] ==
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== Gene Ec-11_005600 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5573462
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* common name:
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* transcription direction:
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** thiamine diphosphokinase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.6.2 EC-2.7.6.2]
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** 5576081
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* centisome position:
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** 88.61311   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_031_0200
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** Esi031_0200
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[THIAMINE]][c] '''=>''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 thiamine[c] '''=>''' 1 thiamine diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_002580]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6898]], thiamine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6898 PWY-6898]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5573462}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11576 11576]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5576081}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00619 R00619]
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{{#set: centisome position=88.61311    }}
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* UNIPROT:
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{{#set: common name=Esi_031_0200|Esi031_0200}}
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** [http://www.uniprot.org/uniprot/P35202 P35202]
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{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P41888 P41888]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=thiamine diphosphokinase}}
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{{#set: ec number=EC-2.7.6.2}}
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{{#set: gene associated=Ec-06_002580}}
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{{#set: in pathway=PWY-6907|PWY-6898|PWY-7356|PWY-6908}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:01, 21 March 2018

Gene Ec-11_005600

  • left end position:
    • 5573462
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5576081
  • centisome position:
    • 88.61311
  • Synonym(s):
    • Esi_031_0200
    • Esi031_0200

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005600&oldid=23891"