Difference between revisions of "HOMOGENTISATE-12-DIOXYGENASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-131567 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE-12-DIOXYGENASE-RXN HOMOGENTISATE-12-DIOXYGENASE-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-131567 TAX-131567]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** sciadonate biosynthesis
+
** homogentisate 1,2-dioxygenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.13.11.5 EC-1.13.11.5]
 
* Synonym(s):
 
* Synonym(s):
−
** 5,11,14-eicosatrienoic acid biosynthesis
 
−
** 5,11,14-eicosatrienoate biosynthesis
 
−
** sciadonic acid biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''4''' reactions found over '''5''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-16094]]
+
** 1 [[HOMOGENTISATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[4-MALEYL-ACETOACETATE]][c] '''+''' 1 [[PROTON]][c]
−
** 0 associated gene:
+
* With common name(s):
−
** 1 reconstruction source(s) associated:
+
** 1 homogentisate[c] '''+''' 1 oxygen[c] '''=>''' 1 4-maleyl-acetoacetate[c] '''+''' 1 H+[c]
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
 
−
* [[RXN-16095]]
+
== Genes associated with this reaction  ==
−
** 0 associated gene:
+
Genes have been associated with this reaction based on different elements listed below.
−
** 1 reconstruction source(s) associated:
+
* Gene: [[Ec-17_003830]]
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[RXN-16096]]
+
*** Assignment: GO-TERM
−
** 0 associated gene:
+
== Pathways  ==
−
** 1 reconstruction source(s) associated:
+
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[RXN-16097]]
+
== Reconstruction information  ==
−
** 0 associated gene:
+
* Category: [[annotation]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
*** Tool: [[pathwaytools]]
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11677 RXN-11677]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-131567}}
+
* RHEA:
−
{{#set: common name=sciadonate biosynthesis}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15449 15449]
−
{{#set: common name=5,11,14-eicosatrienoic acid biosynthesis|5,11,14-eicosatrienoate biosynthesis|sciadonic acid biosynthesis}}
+
* LIGAND-RXN:
−
{{#set: reaction found=4}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02519 R02519]
−
{{#set: total reaction=5}}
+
* UNIPROT:
−
{{#set: completion rate=80.0}}
+
** [http://www.uniprot.org/uniprot/Q9Y041 Q9Y041]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=homogentisate 1,2-dioxygenase}}
 +
{{#set: ec number=EC-1.13.11.5}}
 +
{{#set: gene associated=Ec-17_003830}}
 +
{{#set: in pathway=TYRFUMCAT-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:01, 21 March 2018

Reaction HOMOGENTISATE-12-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • homogentisate 1,2-dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HOMOGENTISATE-12-DIOXYGENASE-RXN&oldid=23900"