Difference between revisions of "PRPPSYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** ribose phosphate diphospho...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** stearate biosynthesis I (animals and fungi)
+
** ribose phosphate diphosphokinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.6.1 EC-2.7.6.1]
 
* Synonym(s):
 
* Synonym(s):
−
** stearic acid biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''2''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-9546]]
+
** 1 [[RIBOSE-5P]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[PRPP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c]
−
** 0 associated gene:
+
* With common name(s):
−
** 1 reconstruction source(s) associated:
+
** 1 D-ribose 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 H+[c] '''+''' 1 AMP[c]
−
*** [[annotation-esiliculosus_genome]]
+
 
−
* [[RXN-9623]]
+
== Genes associated with this reaction  ==
−
** 4 associated gene(s):
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[Ec-12_008720]]
+
* Gene: [[Ec-26_004100]]
−
*** [[Ec-01_001560]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-02_006430]]
+
*** Assignment: GO-TERM
−
*** [[Ec-03_003710]]
+
* Gene: [[Ec-24_004180]]
−
** 2 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Assignment: GO-TERM
−
*** [[orthology-aragem]]
+
* Gene: [[Ec-06_008650]]
−
== Reaction(s) not found ==
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9543 RXN-9543]
+
*** Assignment: GO-TERM
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9544 RXN-9544]
+
** Source: [[orthology-aragem]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9545 RXN-9545]
+
* Gene: [[Ec-23_003970]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[PWY0-662]], PRPP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-662 PWY0-662]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33154}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15609 15609]
−
{{#set: common name=stearate biosynthesis I (animals and fungi)}}
+
* LIGAND-RXN:
−
{{#set: common name=stearic acid biosynthesis}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
−
{{#set: reaction found=2}}
+
* UNIPROT:
−
{{#set: total reaction=6}}
+
** [http://www.uniprot.org/uniprot/Q63468 Q63468]
−
{{#set: completion rate=33.0}}
+
** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
 +
** [http://www.uniprot.org/uniprot/O67556 O67556]
 +
** [http://www.uniprot.org/uniprot/P44328 P44328]
 +
** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
 +
** [http://www.uniprot.org/uniprot/P56184 P56184]
 +
** [http://www.uniprot.org/uniprot/P65235 P65235]
 +
** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
 +
** [http://www.uniprot.org/uniprot/P42816 P42816]
 +
** [http://www.uniprot.org/uniprot/Q59988 Q59988]
 +
** [http://www.uniprot.org/uniprot/P14193 P14193]
 +
** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
 +
** [http://www.uniprot.org/uniprot/P0A717 P0A717]
 +
** [http://www.uniprot.org/uniprot/P60891 P60891]
 +
** [http://www.uniprot.org/uniprot/P11908 P11908]
 +
** [http://www.uniprot.org/uniprot/P21108 P21108]
 +
** [http://www.uniprot.org/uniprot/P60892 P60892]
 +
** [http://www.uniprot.org/uniprot/P09330 P09330]
 +
** [http://www.uniprot.org/uniprot/P32895 P32895]
 +
** [http://www.uniprot.org/uniprot/Q59489 Q59489]
 +
** [http://www.uniprot.org/uniprot/P38620 P38620]
 +
** [http://www.uniprot.org/uniprot/P38063 P38063]
 +
** [http://www.uniprot.org/uniprot/P38689 P38689]
 +
** [http://www.uniprot.org/uniprot/Q42581 Q42581]
 +
** [http://www.uniprot.org/uniprot/P41831 P41831]
 +
** [http://www.uniprot.org/uniprot/P46585 P46585]
 +
** [http://www.uniprot.org/uniprot/Q42583 Q42583]
 +
** [http://www.uniprot.org/uniprot/Q14558 Q14558]
 +
** [http://www.uniprot.org/uniprot/Q55848 Q55848]
 +
** [http://www.uniprot.org/uniprot/Q49042 Q49042]
 +
** [http://www.uniprot.org/uniprot/O64888 O64888]
 +
** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
 +
** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=ribose phosphate diphosphokinase}}
 +
{{#set: ec number=EC-2.7.6.1}}
 +
{{#set: gene associated=Ec-26_004100|Ec-24_004180|Ec-06_008650|Ec-23_003970}}
 +
{{#set: in pathway=PWY0-662}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:01, 21 March 2018

Reaction PRPPSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ribose phosphate diphosphokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-ribose 5-phosphate[c] + 1 ATP[c] <=> 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 H+[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-662, PRPP biosynthesis I: PWY0-662
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PRPPSYN-RXN&oldid=23932"