Difference between revisions of "PRPPSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** ribose phosphate diphospho...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** ribose phosphate diphosphokinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
+
** [http://enzyme.expasy.org/EC/2.7.6.1 EC-2.7.6.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[ACP]][c]
+
** 1 [[RIBOSE-5P]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[PRPP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a palmitoyl-[acp][c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 palmitate[c] '''+''' 1 a holo-[acyl-carrier protein][c]
+
** 1 D-ribose 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 H+[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-26_004100]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-24_004180]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-06_008650]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-23_003970]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7746]], mycobacterial sulfolipid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7746 PWY-7746]
+
* [[PWY0-662]], PRPP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-662 PWY0-662]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
−
** '''28''' reactions found over '''31''' reactions in the full pathway
+
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''20''' reactions found over '''31''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-aragem]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30130 30130]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15609 15609]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01706 R01706]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: ec number=EC-3.1.2.14}}
+
** [http://www.uniprot.org/uniprot/Q63468 Q63468]
−
{{#set: in pathway=PWY-7746|PWY-5971|PWY-5994}}
+
** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.uniprot.org/uniprot/O67556 O67556]
−
{{#set: reconstruction tool=meneco}}
+
** [http://www.uniprot.org/uniprot/P44328 P44328]
−
{{#set: reconstruction source=added for gapfilling}}
+
** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
 +
** [http://www.uniprot.org/uniprot/P56184 P56184]
 +
** [http://www.uniprot.org/uniprot/P65235 P65235]
 +
** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
 +
** [http://www.uniprot.org/uniprot/P42816 P42816]
 +
** [http://www.uniprot.org/uniprot/Q59988 Q59988]
 +
** [http://www.uniprot.org/uniprot/P14193 P14193]
 +
** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
 +
** [http://www.uniprot.org/uniprot/P0A717 P0A717]
 +
** [http://www.uniprot.org/uniprot/P60891 P60891]
 +
** [http://www.uniprot.org/uniprot/P11908 P11908]
 +
** [http://www.uniprot.org/uniprot/P21108 P21108]
 +
** [http://www.uniprot.org/uniprot/P60892 P60892]
 +
** [http://www.uniprot.org/uniprot/P09330 P09330]
 +
** [http://www.uniprot.org/uniprot/P32895 P32895]
 +
** [http://www.uniprot.org/uniprot/Q59489 Q59489]
 +
** [http://www.uniprot.org/uniprot/P38620 P38620]
 +
** [http://www.uniprot.org/uniprot/P38063 P38063]
 +
** [http://www.uniprot.org/uniprot/P38689 P38689]
 +
** [http://www.uniprot.org/uniprot/Q42581 Q42581]
 +
** [http://www.uniprot.org/uniprot/P41831 P41831]
 +
** [http://www.uniprot.org/uniprot/P46585 P46585]
 +
** [http://www.uniprot.org/uniprot/Q42583 Q42583]
 +
** [http://www.uniprot.org/uniprot/Q14558 Q14558]
 +
** [http://www.uniprot.org/uniprot/Q55848 Q55848]
 +
** [http://www.uniprot.org/uniprot/Q49042 Q49042]
 +
** [http://www.uniprot.org/uniprot/O64888 O64888]
 +
** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
 +
** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=ribose phosphate diphosphokinase}}
 +
{{#set: ec number=EC-2.7.6.1}}
 +
{{#set: gene associated=Ec-26_004100|Ec-24_004180|Ec-06_008650|Ec-23_003970}}
 +
{{#set: in pathway=PWY0-662}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:01, 21 March 2018

Reaction PRPPSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ribose phosphate diphosphokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-ribose 5-phosphate[c] + 1 ATP[c] <=> 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 H+[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-662, PRPP biosynthesis I: PWY0-662
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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