Difference between revisions of "DIHYDRODIPICSYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1623 RXN-1623] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-acyl-sn-glycerol-3-phosphat...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1623 RXN-1623] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 1-acyl-sn-glycerol-3-phosphate acyltransferase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
 
* Synonym(s):
 
* Synonym(s):
 +
** dihydropicolinate synthetase
 +
** dihydrodipicolinic acid synthase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' 1 [[ACYL-SN-GLYCEROL-3P]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c]
+
** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a long-chain acyl-CoA[c] '''+''' 1 a 1-acyl-sn-glycerol 3-phosphate[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c]
+
** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 H2O[c] '''+''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-02_006160]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-21_003240]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-26_001280]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-12_004670]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
+
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRIGLSYN-PWY TRIGLSYN-PWY]
+
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[gap-filling]]
−
** [[pathwaytools]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19709 19709]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02241 R02241]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P43797 P43797]
 +
** [http://www.uniprot.org/uniprot/O26892 O26892]
 +
** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
 +
** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
 +
** [http://www.uniprot.org/uniprot/P19808 P19808]
 +
** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
 +
** [http://www.uniprot.org/uniprot/O05969 O05969]
 +
** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
 +
** [http://www.uniprot.org/uniprot/Q04796 Q04796]
 +
** [http://www.uniprot.org/uniprot/Q57695 Q57695]
 +
** [http://www.uniprot.org/uniprot/O25657 O25657]
 +
** [http://www.uniprot.org/uniprot/O67216 O67216]
 +
** [http://www.uniprot.org/uniprot/O29352 O29352]
 +
** [http://www.uniprot.org/uniprot/O84366 O84366]
 +
** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
 +
** [http://www.uniprot.org/uniprot/P63945 P63945]
 +
** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
 +
** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
 +
** [http://www.uniprot.org/uniprot/Q43038 Q43038]
 +
** [http://www.uniprot.org/uniprot/P49423 P49423]
 +
** [http://www.uniprot.org/uniprot/Q55513 Q55513]
 +
** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
 +
** [http://www.uniprot.org/uniprot/Q42948 Q42948]
 +
** [http://www.uniprot.org/uniprot/Q42940 Q42940]
 +
** [http://www.uniprot.org/uniprot/O86841 O86841]
 +
** [http://www.uniprot.org/uniprot/P24847 P24847]
 +
** [http://www.uniprot.org/uniprot/P24846 P24846]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=1-acyl-sn-glycerol-3-phosphate acyltransferase}}
+
{{#set: ec number=EC-4.3.3.7}}
−
{{#set: ec number=EC-2.3.1.51}}
+
{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
−
{{#set: gene associated=Ec-02_006160|Ec-21_003240|Ec-26_001280|Ec-12_004670}}
+
{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
−
{{#set: in pathway=PWY-5667|TRIGLSYN-PWY}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 19:01, 21 March 2018

Reaction DIHYDRODIPICSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):
    • dihydropicolinate synthetase
    • dihydrodipicolinic acid synthase

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5097, L-lysine biosynthesis VI: PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III: PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I: DAPLYSINESYN-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2941, L-lysine biosynthesis II: PWY-2941
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=DIHYDRODIPICSYN-RXN&oldid=23976"