Difference between revisions of "RXN-10777"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10777 RXN-10777] == * direction: ** LEFT-TO-RIGHT * common name: ** Aryl sulfotransferase ** P-...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10777 RXN-10777] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 5,6-dimethylbenzimidazole biosynthesis I (aerobic)
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** Aryl sulfotransferase
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** P-loop containing nucleoside triphosphate hydrolase
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** Sulfotransferase domain
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* ec number:
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** [http://enzyme.expasy.org/EC/2.8.2.1 EC-2.8.2.1]
 
* Synonym(s):
 
* Synonym(s):
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** DMB biosynthesis I
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RIBOFLAVINKIN-RXN]]
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** 1 [[SEROTONIN]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CPD-11665]][c] '''+''' 1 [[PROTON]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-04_001490]]
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** 1 serotonin[c] '''+''' 1 3'-phosphoadenylyl-sulfate[c] '''=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 serotonin O-sulfate[c] '''+''' 1 H+[c]
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*** [[Ec-04_004280]]
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*** [[Ec-10_002950]]
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== Genes associated with this reaction  ==
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*** [[Ec-14_005260]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-06_007300]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: EC-NUMBER
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== Reaction(s) not found ==
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* Gene: [[Ec-06_007320]]
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* [http://metacyc.org/META/NEW-IMAGE?object=FMNREDUCT-RXN FMNREDUCT-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8771 RXN-8771]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-06_007310]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-00_005410]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-26_003630]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5,6-dimethylbenzimidazole biosynthesis I (aerobic)}}
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{{#set: common name=Aryl sulfotransferase}}
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{{#set: common name=DMB biosynthesis I}}
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{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
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{{#set: reaction found=1}}
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{{#set: common name=Sulfotransferase domain}}
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{{#set: total reaction=3}}
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{{#set: ec number=EC-2.8.2.1}}
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{{#set: completion rate=33.0}}
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{{#set: gene associated=Ec-06_007300|Ec-06_007320|Ec-06_007310|Ec-00_005410|Ec-26_003630}}
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{{#set: in pathway=PWY-6313}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:02, 21 March 2018

Reaction RXN-10777

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aryl sulfotransferase
    • P-loop containing nucleoside triphosphate hydrolase
    • Sulfotransferase domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 serotonin[c] + 1 3'-phosphoadenylyl-sulfate[c] => 1 adenosine 3',5'-bisphosphate[c] + 1 serotonin O-sulfate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10777&oldid=23996"