Difference between revisions of "RXN-2542"

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(Created page with "Category:Gene == Gene Ec-08_005870 == * left end position: ** 5622408 * transcription direction: ** POSITIVE * right end position: ** 5634963 * centisome position: ** 83.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-methyl-6-phytyl-1,4-benzoqu...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Ec-08_005870 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2542 RXN-2542] ==
* left end position:
+
* direction:
** 5622408
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase
* right end position:
+
* ec number:
** 5634963
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** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
* centisome position:
+
** 83.9533   
+
 
* Synonym(s):
 
* Synonym(s):
** Esi_0005_0190
 
** Esi0005_0190
 
** TrpRS
 
  
== Reactions associated ==
+
== Reaction Formula ==
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[MPBQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DMPBQ]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
***ec-number
+
* With common name(s):
== Pathways associated ==
+
** 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
* [[TRNA-CHARGING-PWY]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-21_003900]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways ==
 +
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=5622408}}
+
* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07501 R07501]
{{#set: right end position=5634963}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=83.9533    }}
+
{{#set: common name=2-methyl-6-phytyl-1,4-benzoquinone methyltransferase}}
{{#set: common name=Esi_0005_0190|Esi0005_0190|TrpRS}}
+
{{#set: ec number=EC-2.1.1.295}}
{{#set: reaction associated=TRYPTOPHAN--TRNA-LIGASE-RXN}}
+
{{#set: gene associated=Ec-21_003900}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: in pathway=PWY-1422}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:02, 21 March 2018

Reaction RXN-2542

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methyl-6-phytyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 2,3-dimethyl-6-phytyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-homocysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links