Difference between revisions of "Ec-00 008830"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate dehydrogenase/fum...")
 
(Created page with "Category:Gene == Gene Ec-00_008830 == * left end position: ** 14608008 * transcription direction: ** POSITIVE * right end position: ** 14613250 * centisome position: ** 77...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] ==
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== Gene Ec-00_008830 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 14608008
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* common name:
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* transcription direction:
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** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
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** POSITIVE
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** SDH4, succinate dehydrogenase subunit 4
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* right end position:
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** SDH1, succinate dehydrogenase subunit 1
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** 14613250
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** SDH3, succinate dehydrogenase subunit 3
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* centisome position:
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** SDH2, succinate dehydrogenase subunit 2
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** 77.10163   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0646_0004
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** Esi0646_0004
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** CYS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACSERLY-RXN]]
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** 1 [[CPD-9612]][c] '''+''' 1 [[SUC]][c] '''=>''' 1 [[CPD-15301]][c] '''+''' 1 [[FUM]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 caldariellaquinone[c] '''+''' 1 succinate[c] '''=>''' 1 caldariellaquinol[c] '''+''' 1 fumarate[c]
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* Reaction: [[RXN-12726]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-07_007310]]
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* Reaction: [[RXN0-2381]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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*** Assignment: automated-name-match
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* [[Ec-05_003640]]
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* Reaction: [[RXN0-2382]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: automated-name-match
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* [[Ec-07_002870]]
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* Reaction: [[SULFOCYS-RXN]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Ec-21_003470]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[TRYPSYN-RXN]]
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***EC-NUMBER
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-11_000360]]
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*** Assignment: automated-name-match
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** ESILICULOSUS_GENOME
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== Pathways associated ==
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***EC-NUMBER
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* [[CYSTSYN-PWY]]
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* [[Ec-27_006560]]
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* [[PWY-6949]]
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** ESILICULOSUS_GENOME
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* [[PWY-6936]]
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***AUTOMATED-NAME-MATCH
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* [[TRPSYN-PWY]]
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=14608008}}
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{{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
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{{#set: right end position=14613250}}
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{{#set: common name=SDH1, succinate dehydrogenase subunit 1}}
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{{#set: centisome position=77.10163    }}
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{{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
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{{#set: common name=Esi_0646_0004|Esi0646_0004|CYS}}
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{{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
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{{#set: reaction associated=ACSERLY-RXN|RXN-12726|RXN0-2381|RXN0-2382|SULFOCYS-RXN|TRYPSYN-RXN}}
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{{#set: ec number=EC-1.3.5.1}}
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{{#set: pathway associated=CYSTSYN-PWY|PWY-6949|PWY-6936|TRPSYN-PWY}}
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{{#set: gene associated=Ec-07_007310|Ec-05_003640|Ec-07_002870|Ec-21_003470|Ec-11_000360|Ec-27_006560}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:02, 21 March 2018

Gene Ec-00_008830

  • left end position:
    • 14608008
  • transcription direction:
    • POSITIVE
  • right end position:
    • 14613250
  • centisome position:
    • 77.10163
  • Synonym(s):
    • Esi_0646_0004
    • Esi0646_0004
    • CYS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_008830&oldid=24087"