Difference between revisions of "UDPGLUCEPIM-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** UDP-glucose 4-epim...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** UDP-glucose 4-epim...") |
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== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[Ec- | + | * Gene: [[Ec-04_000280]] |
− | ** [[ | + | ** Source: [[orthology-aragem]] |
− | * [[Ec- | + | * Gene: [[Ec-04_004180]] |
− | ** [[ | + | ** Source: [[orthology-aragem]] |
− | * [[Ec-05_006710]] | + | * Gene: [[Ec-05_006710]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | ** [[ | + | ** Source: [[orthology-aragem]] |
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-7344]], UDP-D-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7344 PWY-7344] |
− | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
* [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397] | * [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397] | ||
** '''1''' reactions found over '''17''' reactions in the full pathway | ** '''1''' reactions found over '''17''' reactions in the full pathway | ||
− | * [[ | + | * [[COLANSYN-PWY]], colanic acid building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY] |
− | ** ''' | + | ** '''6''' reactions found over '''11''' reactions in the full pathway |
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527] | * [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527] | ||
** '''5''' reactions found over '''7''' reactions in the full pathway | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328] | * [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328] | ||
** '''4''' reactions found over '''10''' reactions in the full pathway | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
− | * [[ | + | * [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] | * [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] |
− | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]] | + | * Category: [[orthology]] |
− | ** [[ | + | ** Source: [[orthology-aragem]] |
− | *** [[ | + | *** Tool: [[pantograph]] |
− | * [[annotation]] | + | * Category: [[annotation]] |
− | ** [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
− | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
Line 96: | Line 96: | ||
{{#set: common name=UDP-glucose 4-epimerase}} | {{#set: common name=UDP-glucose 4-epimerase}} | ||
{{#set: ec number=EC-5.1.3.2}} | {{#set: ec number=EC-5.1.3.2}} | ||
− | {{#set: gene associated=Ec- | + | {{#set: gene associated=Ec-04_000280|Ec-04_004180|Ec-05_006710}} |
− | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-7344|PWY-6397|COLANSYN-PWY|PWY-6527|PWY-7328|PWY-6317|PWY66-422|PWY-3821}} |
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
− | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | |
− | {{#set: reconstruction source=aragem | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
− | + | ||
− | {{#set: reconstruction tool=pathwaytools | + | |
− | + |
Latest revision as of 20:03, 21 March 2018
Contents
Reaction UDPGLUCEPIM-RXN
- direction:
- REVERSIBLE
- common name:
- UDP-glucose 4-epimerase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 UDP-α-D-glucose[c] <=> 1 UDP-α-D-galactose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-04_000280
- Source: orthology-aragem
- Gene: Ec-04_004180
- Source: orthology-aragem
- Gene: Ec-05_006710
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- PWY-7344, UDP-D-galactose biosynthesis: PWY-7344
- 1 reactions found over 1 reactions in the full pathway
- PWY-6397, mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: PWY-6397
- 1 reactions found over 17 reactions in the full pathway
- COLANSYN-PWY, colanic acid building blocks biosynthesis: COLANSYN-PWY
- 6 reactions found over 11 reactions in the full pathway
- PWY-6527, stachyose degradation: PWY-6527
- 5 reactions found over 7 reactions in the full pathway
- PWY-7328, superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: PWY-7328
- 4 reactions found over 10 reactions in the full pathway
- PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
- 5 reactions found over 5 reactions in the full pathway
- PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
- 5 reactions found over 5 reactions in the full pathway
- PWY-3821, D-galactose degradation III: PWY-3821
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: