Difference between revisions of "RXN-14903"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERKIN-RXN HOMOSERKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** homoserine kinase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] == * direction: ** LEFT-TO-RIGHT * common name: ** proline dehydrogenase * ec...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERKIN-RXN HOMOSERKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** homoserine kinase
+
** proline dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.39 EC-2.7.1.39]
+
** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HOMO-SER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c]
+
** 1 [[ETR-Quinones]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ETR-Quinols]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-homoserine[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 O-phospho-L-homoserine[c]
+
** 1 an electron-transfer quinone[c] '''+''' 1 L-proline[c] '''=>''' 1 H+[c] '''+''' 1 an electron-transfer quinol[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-11_006270]]
+
* Gene: [[Ec-18_001350]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
+
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
+
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5737 PWY-5737]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P27722 P27722]
+
** [http://www.uniprot.org/uniprot/P95629 P95629]
−
** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3]
+
** [http://www.uniprot.org/uniprot/Q59206 Q59206]
−
** [http://www.uniprot.org/uniprot/P04948 P04948]
+
** [http://www.uniprot.org/uniprot/P74275 P74275]
−
** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7]
+
** [http://www.uniprot.org/uniprot/P10503 P10503]
−
** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7]
+
** [http://www.uniprot.org/uniprot/Q51873 Q51873]
−
** [http://www.uniprot.org/uniprot/P44504 P44504]
+
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
−
** [http://www.uniprot.org/uniprot/P52991 P52991]
+
** [http://www.uniprot.org/uniprot/O24897 O24897]
−
** [http://www.uniprot.org/uniprot/P00547 P00547]
+
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
−
** [http://www.uniprot.org/uniprot/P07128 P07128]
+
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
−
** [http://www.uniprot.org/uniprot/P17423 P17423]
+
** [http://www.uniprot.org/uniprot/P09546 P09546]
−
** [http://www.uniprot.org/uniprot/P73646 P73646]
+
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
 +
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
 +
** [http://www.uniprot.org/uniprot/Q04499 Q04499]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=homoserine kinase}}
+
{{#set: common name=proline dehydrogenase}}
−
{{#set: ec number=EC-2.7.1.39}}
+
{{#set: ec number=EC-1.5.5.2}}
−
{{#set: gene associated=Ec-11_006270}}
+
{{#set: gene associated=Ec-18_001350}}
−
{{#set: in pathway=PWY-702|HOMOSER-THRESYN-PWY}}
+
{{#set: in pathway=PROUT-PWY|PWY-6922|PWY-5737|CITRULBIO-PWY}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:03, 21 March 2018

Reaction RXN-14903

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • proline dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PROUT-PWY, L-proline degradation: PROUT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-5737, (5R)-carbapenem carboxylate biosynthesis: PWY-5737
    • 1 reactions found over 6 reactions in the full pathway
  • CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14903&oldid=24210"