Difference between revisions of "FORMATETHFLIG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formate-tet...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7255 PWY-7255] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28221 TAX-28221]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1236 TAX-1236]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28216 TAX-28216]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28211 TAX-28211]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-976 TAX-976]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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* common name:
 
* common name:
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** ergothioneine biosynthesis I (bacteria)
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** formate-tetrahydrofolate ligase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.4.3 EC-6.3.4.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[GLUTCYSLIG-RXN]]
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** 1 [[FORMATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[THF-GLU-N]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14428 RXN-14428]
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** 1 formate[c] '''+''' 1 ATP[c] '''+''' 1 a tetrahydrofolate[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14429 RXN-14429]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14430 RXN-14430]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14431 RXN-14431]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15804 RXN-15804]
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* Gene: [[Ec-25_001900]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-01_009540]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-28221}}
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* RHEA:
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{{#set: taxonomic range=TAX-1236}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221]
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{{#set: taxonomic range=TAX-28216}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-28211}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
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{{#set: taxonomic range=TAX-976}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-1117}}
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** [http://www.uniprot.org/uniprot/P09440 P09440]
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{{#set: taxonomic range=TAX-201174}}
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** [http://www.uniprot.org/uniprot/P13419 P13419]
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{{#set: common name=ergothioneine biosynthesis I (bacteria)}}
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** [http://www.uniprot.org/uniprot/P07245 P07245]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P11586 P11586]
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{{#set: reaction not found=6}}
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** [http://www.uniprot.org/uniprot/P21164 P21164]
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{{#set: completion rate=17.0}}
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** [http://www.uniprot.org/uniprot/P28723 P28723]
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** [http://www.uniprot.org/uniprot/Q9JVY8 Q9JVY8]
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** [http://www.uniprot.org/uniprot/Q9CH07 Q9CH07]
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** [http://www.uniprot.org/uniprot/Q07064 Q07064]
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** [http://www.uniprot.org/uniprot/Q27772 Q27772]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formate-tetrahydrofolate ligase}}
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{{#set: ec number=EC-6.3.4.3}}
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{{#set: gene associated=Ec-25_001900|Ec-01_009540}}
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{{#set: in pathway=PWY-2201|PWY-1722|PWY-2161|CODH-PWY|PWY-3841}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:03, 21 March 2018

Reaction FORMATETHFLIG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • formate-tetrahydrofolate ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 formate[c] + 1 ATP[c] + 1 a tetrahydrofolate[c] => 1 phosphate[c] + 1 ADP[c] + 1 an N10-formyl-tetrahydrofolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2201, folate transformations I: PWY-2201
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-2161, folate polyglutamylation: PWY-2161
    • 5 reactions found over 5 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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