Difference between revisions of "Ec-21 004220"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Ec-21_004220 == * left end position: ** 5164100 * transcription direction: ** POSITIVE * right end position: ** 5181227 * centisome position: ** 69.9...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] ==
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== Gene Ec-21_004220 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5164100
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* common name:
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* transcription direction:
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** glutaminyl-tRNA synthase
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** POSITIVE
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** Glutaminyl-tRNA Synthetase
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* right end position:
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* ec number:
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** 5181227
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** [http://enzyme.expasy.org/EC/6.1.1.18 EC-6.1.1.18]
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* centisome position:
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** 69.97313   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0311_0012
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** Esi0311_0012
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** LHCP35
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PHOSGLYPHOS-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[GLN-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 L-glutamine[c] '''+''' 1 a tRNAgln[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-glutaminyl-[tRNAgln][c] '''+''' 1 AMP[c]
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== Pathways associated ==
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* [[PWY-1042]]
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== Genes associated with this reaction  ==
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* [[PWY-7003]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLUCONEO-PWY]]
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* [[Ec-10_000780]]
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* [[SUCSYN-PWY]]
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** ESILICULOSUS_GENOME
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* [[PWY-6901]]
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***EC-NUMBER
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* [[P124-PWY]]
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* [[Ec-17_003970]]
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* [[GLYCOLYSIS]]
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** ESILICULOSUS_GENOME
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* [[PWY-6886]]
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***AUTOMATED-NAME-MATCH
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* [[CALVIN-PWY]]
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== Pathways  ==
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* [[ANAGLYCOLYSIS-PWY]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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* [[PWY-5484]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[P185-PWY]]
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== Reconstruction information  ==
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* [[P122-PWY]]
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* [[annotation]]:
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* [[PWY66-399]]
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5164100}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20121 20121]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5181227}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03652 R03652]
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{{#set: centisome position=69.97313    }}
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* UNIPROT:
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{{#set: common name=Esi_0311_0012|Esi0311_0012|LHCP35}}
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** [http://www.uniprot.org/uniprot/O59314 O59314]
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{{#set: reaction associated=PHOSGLYPHOS-RXN}}
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** [http://www.uniprot.org/uniprot/P43831 P43831]
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{{#set: pathway associated=PWY-1042|PWY-7003|GLUCONEO-PWY|SUCSYN-PWY|PWY-6901|P124-PWY|GLYCOLYSIS|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|P122-PWY|PWY66-399}}
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** [http://www.uniprot.org/uniprot/P47897 P47897]
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** [http://www.uniprot.org/uniprot/P14325 P14325]
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** [http://www.uniprot.org/uniprot/P95968 P95968]
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** [http://www.uniprot.org/uniprot/P13188 P13188]
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** [http://www.uniprot.org/uniprot/P00962 P00962]
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** [http://www.uniprot.org/uniprot/P52780 P52780]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutaminyl-tRNA synthase}}
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{{#set: common name=Glutaminyl-tRNA Synthetase}}
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{{#set: ec number=EC-6.1.1.18}}
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{{#set: gene associated=Ec-10_000780|Ec-17_003970}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:03, 21 March 2018

Gene Ec-21_004220

  • left end position:
    • 5164100
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5181227
  • centisome position:
    • 69.97313
  • Synonym(s):
    • Esi_0311_0012
    • Esi0311_0012
    • LHCP35

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_004220&oldid=24232"