Difference between revisions of "1.21.3.1-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S-ADENOSYLMETHIONINE S-ADENOSYLMETHIONINE] == * smiles: ** C[S+](CC3(C(O)C(O)C(N2(C1(N=CN=C(N)C...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.21.3.1-RXN 1.21.3.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Isopenicillin N synth...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S-ADENOSYLMETHIONINE S-ADENOSYLMETHIONINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.21.3.1-RXN 1.21.3.1-RXN] ==
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* smiles:
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* direction:
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** C[S+](CC3(C(O)C(O)C(N2(C1(N=CN=C(N)C=1N=C2)))O3))CCC(C([O-])=O)[N+]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=MEFKEPWMEQBLKI-AIRLBKTGSA-O
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* common name:
 
* common name:
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** S-adenosyl-L-methionine
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** Isopenicillin N synthase
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* molecular weight:
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* ec number:
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** 399.444   
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** [http://enzyme.expasy.org/EC/1.21.3.1 EC-1.21.3.1]
 
* Synonym(s):
 
* Synonym(s):
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** AdoMet
 
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** SAM
 
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** 2-S-adenosyl-L-methionine
 
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** S-adenosyl-methionine
 
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** adenosylmethionine
 
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** S-adenosylmethionine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[ADOMET-DMK-METHYLTRANSFER-RXN]]
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* With identifiers:
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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** 1 [[N-5S-5-AMINO-5-CARBOXYPENTANOYL-L-CY]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[ISOPENICILLIN-N]][c] '''+''' 2 [[WATER]][c]
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* [[RXN-7421]]
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* With common name(s):
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* [[RXN-14177]]
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** 1 N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine[c] '''+''' 1 oxygen[c] '''=>''' 1 isopenicillin N[c] '''+''' 2 H2O[c]
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* [[RXN0-5063]]
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* [[RXN-1104]]
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== Genes associated with this reaction  ==
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* [[2.1.1.72-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
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* Gene: [[Ec-08_003510]]
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* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-1143]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[2.8.1.6-RXN]]
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== Pathways  ==
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* [[UROPORIIIMETHYLTRANSA-RXN]]
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* [[PWY-5629]], isopenicillin N biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5629 PWY-5629]
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* [[2.1.1.100-RXN]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN]]
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== Reconstruction information  ==
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* [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
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* Category: [[annotation]]
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* [[RXN1G-2544]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN4FS-2]]
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*** Tool: [[pathwaytools]]
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* [[RXN-11374]]
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* [[HEMN-RXN]]
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* [[RXN-11373]]
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* [[RXN-11370]]
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* [[RXN-13403]]
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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* [[RXN-13406]]
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* [[TOCOPHEROL-O-METHYLTRANSFERASE-RXN]]
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* [[RXN1G-3641]]
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* [[RXN-3422]]
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* [[RXN0-5144]]
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* [[2.1.1.113-RXN]]
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* [[SAMDECARB-RXN]]
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* [[RXN-2542]]
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* [[TRNA-URACIL-5--METHYLTRANSFERASE-RXN]]
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* [[TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN]]
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* [[RXN-2562]]
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* [[THIOPURINE-S-METHYLTRANSFERASE-RXN]]
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* [[RXN0-5419]]
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* [[2.1.1.17-RXN]]
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* [[2.1.1.71-RXN]]
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* [[2.1.1.77-RXN]]
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* [[2.1.1.79-RXN]]
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* [[RXN-14481]]
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* [[4.4.1.14-RXN]]
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* [[RXN-14549]]
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* [[RXN-14326]]
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* [[RXN-8675]]
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* [[RXN-4021]]
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== Reaction(s) known to produce the compound ==
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* [[S-ADENMETSYN-RXN]]
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== Reaction(s) of unknown directionality ==
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* [[RXN-14480]]
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* [[RXN-17473]]
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* [[RXN-17472]]
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* [[DAPASYN-RXN]]
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== External links  ==
 
== External links  ==
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* CAS : 29908-03-0
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* RHEA:
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* BIGG : 33530
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22428 22428]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24762165 24762165]
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** [http://www.genome.jp/dbget-bin/www_bget?R04872 R04872]
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* HMDB : HMDB01185
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=Isopenicillin N synthase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00019 C00019]
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{{#set: ec number=EC-1.21.3.1}}
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* CHEBI:
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{{#set: gene associated=Ec-08_003510}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=59789 59789]
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{{#set: in pathway=PWY-5629}}
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* METABOLIGHTS : MTBLC59789
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C[S+](CC3(C(O)C(O)C(N2(C1(N=CN=C(N)C=1N=C2)))O3))CCC(C([O-])=O)[N+]}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: inchi key=InChIKey=MEFKEPWMEQBLKI-AIRLBKTGSA-O}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=S-adenosyl-L-methionine}}
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{{#set: molecular weight=399.444    }}
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{{#set: common name=AdoMet|SAM|2-S-adenosyl-L-methionine|S-adenosyl-methionine|adenosylmethionine|S-adenosylmethionine}}
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{{#set: consumed by=ADOMET-DMK-METHYLTRANSFER-RXN|RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN|RXN-7421|RXN-14177|RXN0-5063|RXN-1104|2.1.1.72-RXN|2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN|HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN|RXN-1143|2.8.1.6-RXN|UROPORIIIMETHYLTRANSA-RXN|2.1.1.100-RXN|DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN|HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN|RXN1G-2544|RXN4FS-2|RXN-11374|HEMN-RXN|RXN-11373|RXN-11370|RXN-13403|CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN|RXN-13406|TOCOPHEROL-O-METHYLTRANSFERASE-RXN|RXN1G-3641|RXN-3422|RXN0-5144|2.1.1.113-RXN|SAMDECARB-RXN|RXN-2542|TRNA-URACIL-5--METHYLTRANSFERASE-RXN|TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN|RXN-2562|THIOPURINE-S-METHYLTRANSFERASE-RXN|RXN0-5419|2.1.1.17-RXN|2.1.1.71-RXN|2.1.1.77-RXN|2.1.1.79-RXN|RXN-14481|4.4.1.14-RXN|RXN-14549|RXN-14326|RXN-8675|RXN-4021}}
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{{#set: produced by=S-ADENMETSYN-RXN}}
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{{#set: consumed or produced by=RXN-14480|RXN-17473|RXN-17472|DAPASYN-RXN}}
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Latest revision as of 19:04, 21 March 2018

Reaction 1.21.3.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Isopenicillin N synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5629, isopenicillin N biosynthesis: PWY-5629
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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