Difference between revisions of "PWY-6061"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] == * direction: ** LEFT-TO-RIGHT * common name: ** proline dehydrogenase * ec...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-77...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
 
* common name:
 
* common name:
−
** proline dehydrogenase
+
** bile acid biosynthesis, neutral pathway
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** bile acid biosynthesis (classic pathway)
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''29''' reactions in the full pathway
−
** 1 [[ETR-Quinones]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ETR-Quinols]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c]
+
* [[2.3.1.176-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 an electron-transfer quinone[c] '''+''' 1 L-proline[c] '''=>''' 1 H+[c] '''+''' 1 an electron-transfer quinol[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c]
+
*** [[Ec-26_003940]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-aragem]]
−
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) not found ==
−
* Gene: [[Ec-18_001350]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.181-RXN 1.1.1.181-RXN]
−
** Source: [[annotation-esiliculosus_genome]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.95-RXN 1.14.13.95-RXN]
−
*** Assignment: EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.40-RXN 1.2.1.40-RXN]
−
== Pathways  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.107-RXN 4.2.1.107-RXN]
−
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
+
* [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.28-RXN 6.2.1.28-RXN]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.29-RXN 6.2.1.29-RXN]
−
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTANETRIOL-26-MONOOXYGENASE-RXN CHOLESTANETRIOL-26-MONOOXYGENASE-RXN]
−
* [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5737 PWY-5737]
+
* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-N-CHOLOYLTRANSFERASE-RXN GLYCINE-N-CHOLOYLTRANSFERASE-RXN]
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9794 RXN-9794]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9796 RXN-9796]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9797 RXN-9797]
−
* Category: [[annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9798 RXN-9798]
−
** Source: [[annotation-esiliculosus_genome]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9799 RXN-9799]
−
*** Tool: [[pathwaytools]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9800 RXN-9800]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9840 RXN-9840]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9841 RXN-9841]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9842 RXN-9842]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9843 RXN-9843]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9844 RXN-9844]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9845 RXN-9845]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9846 RXN-9846]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9847 RXN-9847]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9848 RXN-9848]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9850 RXN-9850]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9851 RXN-9851]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9852 RXN-9852]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* REACTOME : REACT_11041
−
** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253]
+
* LIGAND-MAP:
−
* UNIPROT:
+
** [http://www.genome.jp/dbget-bin/www_bget?map00120 map00120]
−
** [http://www.uniprot.org/uniprot/P95629 P95629]
+
{{#set: taxonomic range=TAX-7742}}
−
** [http://www.uniprot.org/uniprot/Q59206 Q59206]
+
{{#set: common name=bile acid biosynthesis, neutral pathway}}
−
** [http://www.uniprot.org/uniprot/P74275 P74275]
+
{{#set: common name=bile acid biosynthesis (classic pathway)}}
−
** [http://www.uniprot.org/uniprot/P10503 P10503]
+
{{#set: reaction found=1}}
−
** [http://www.uniprot.org/uniprot/Q51873 Q51873]
+
{{#set: total reaction=29}}
−
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
+
{{#set: completion rate=3.0}}
−
** [http://www.uniprot.org/uniprot/O24897 O24897]
+
−
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
+
−
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
+
−
** [http://www.uniprot.org/uniprot/P09546 P09546]
+
−
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
+
−
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
+
−
** [http://www.uniprot.org/uniprot/Q04499 Q04499]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=proline dehydrogenase}}
+
−
{{#set: ec number=EC-1.5.5.2}}
+
−
{{#set: gene associated=Ec-18_001350}}
+
−
{{#set: in pathway=PROUT-PWY|PWY-6922|PWY-5737|CITRULBIO-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:04, 21 March 2018

Pathway PWY-6061

  • taxonomic range:
  • common name:
    • bile acid biosynthesis, neutral pathway
  • Synonym(s):
    • bile acid biosynthesis (classic pathway)

Reaction(s) found

1 reactions found over 29 reactions in the full pathway

Reaction(s) not found

External links

  • REACTOME : REACT_11041
  • LIGAND-MAP:




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6061&oldid=24350"