Difference between revisions of "PWY-6061"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] == * direction: ** LEFT-TO-RIGHT * common name: ** proline dehydrogenase * ec...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-77...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
 
* common name:
 
* common name:
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** proline dehydrogenase
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** bile acid biosynthesis, neutral pathway
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* ec number:
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** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
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* Synonym(s):
 
* Synonym(s):
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** bile acid biosynthesis (classic pathway)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''29''' reactions in the full pathway
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** 1 [[ETR-Quinones]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ETR-Quinols]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c]
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* [[2.3.1.176-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 an electron-transfer quinone[c] '''+''' 1 L-proline[c] '''=>''' 1 H+[c] '''+''' 1 an electron-transfer quinol[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c]
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*** [[Ec-26_003940]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Ec-18_001350]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.181-RXN 1.1.1.181-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.95-RXN 1.14.13.95-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.40-RXN 1.2.1.40-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.107-RXN 4.2.1.107-RXN]
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* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.28-RXN 6.2.1.28-RXN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.29-RXN 6.2.1.29-RXN]
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* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN CHOLESTANETETRAOL-26-DEHYDROGENASE-RXN]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTANETRIOL-26-MONOOXYGENASE-RXN CHOLESTANETRIOL-26-MONOOXYGENASE-RXN]
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* [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5737 PWY-5737]
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* [http://metacyc.org/META/NEW-IMAGE?object=CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-N-CHOLOYLTRANSFERASE-RXN GLYCINE-N-CHOLOYLTRANSFERASE-RXN]
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9794 RXN-9794]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9796 RXN-9796]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9797 RXN-9797]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9798 RXN-9798]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9799 RXN-9799]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9800 RXN-9800]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9840 RXN-9840]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9841 RXN-9841]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9842 RXN-9842]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9843 RXN-9843]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9844 RXN-9844]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9845 RXN-9845]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9846 RXN-9846]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9847 RXN-9847]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9848 RXN-9848]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9850 RXN-9850]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9851 RXN-9851]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9852 RXN-9852]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* REACTOME : REACT_11041
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** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253]
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* LIGAND-MAP:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?map00120 map00120]
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** [http://www.uniprot.org/uniprot/P95629 P95629]
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{{#set: taxonomic range=TAX-7742}}
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** [http://www.uniprot.org/uniprot/Q59206 Q59206]
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{{#set: common name=bile acid biosynthesis, neutral pathway}}
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** [http://www.uniprot.org/uniprot/P74275 P74275]
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{{#set: common name=bile acid biosynthesis (classic pathway)}}
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** [http://www.uniprot.org/uniprot/P10503 P10503]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/Q51873 Q51873]
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{{#set: total reaction=29}}
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** [http://www.uniprot.org/uniprot/Q59426 Q59426]
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{{#set: completion rate=3.0}}
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** [http://www.uniprot.org/uniprot/O24897 O24897]
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** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
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** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
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** [http://www.uniprot.org/uniprot/P09546 P09546]
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** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
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** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
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** [http://www.uniprot.org/uniprot/Q04499 Q04499]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=proline dehydrogenase}}
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{{#set: ec number=EC-1.5.5.2}}
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{{#set: gene associated=Ec-18_001350}}
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{{#set: in pathway=PROUT-PWY|PWY-6922|PWY-5737|CITRULBIO-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:04, 21 March 2018

Pathway PWY-6061

  • taxonomic range:
  • common name:
    • bile acid biosynthesis, neutral pathway
  • Synonym(s):
    • bile acid biosynthesis (classic pathway)

Reaction(s) found

1 reactions found over 29 reactions in the full pathway

Reaction(s) not found

External links

  • REACTOME : REACT_11041
  • LIGAND-MAP:




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