Difference between revisions of "Ec-28 003190"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain ** B...")
 
(Created page with "Category:Gene == Gene Ec-28_003190 == * left end position: ** 3033822 * transcription direction: ** NEGATIVE * right end position: ** 3042465 * centisome position: ** 80.0...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] ==
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== Gene Ec-28_003190 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3033822
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* common name:
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* transcription direction:
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** ClpP/crotonase-like domain
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** NEGATIVE
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* right end position:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 3042465
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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** 80.06878   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0009_0096
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** Esi0009_0096
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HOMOCYSMET-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[E-PHENYLITACONYL-COA]][c] '''=>''' 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 (E)-2-benzylidenesuccinyl-CoA[c] '''=>''' 1 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-12730]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Ec-16_003560]]
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== Pathways associated ==
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** ESILICULOSUS_GENOME
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* [[PWY-6936]]
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***EC-NUMBER
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* [[PWY-702]]
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* [[Ec-06_001380]]
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* [[HOMOSER-METSYN-PWY]]
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** ESILICULOSUS_GENOME
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* [[HSERMETANA-PWY]]
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***EC-NUMBER
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* [[PWY-5041]]
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* [[Ec-14_006530]]
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* [[PWY-6151]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-16_001250]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-81 PWY-81]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3033822}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05599 R05599]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3042465}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: centisome position=80.06878    }}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: common name=Esi_0009_0096|Esi0009_0096}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: reaction associated=HOMOCYSMET-RXN|RXN-12730}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: pathway associated=PWY-6936|PWY-702|HOMOSER-METSYN-PWY|HSERMETANA-PWY|PWY-5041|PWY-6151}}
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{{#set: gene associated=Ec-16_003560|Ec-06_001380|Ec-14_006530|Ec-16_001250}}
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{{#set: in pathway=PWY-81}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:04, 21 March 2018

Gene Ec-28_003190

  • left end position:
    • 3033822
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3042465
  • centisome position:
    • 80.06878
  • Synonym(s):
    • Esi_0009_0096
    • Esi0009_0096

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-28_003190&oldid=24371"