Difference between revisions of "RIBOKIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17323 CPD-17323] == * smiles: ** CCCCCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-RXN RIBOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribokinase * ec number:...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17323 CPD-17323] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-RXN RIBOKIN-RXN] ==
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* smiles:
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* direction:
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** CCCCCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=LVXQCHCSSLFKLO-KPOVBLHLSA-J
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* common name:
 
* common name:
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** adrenoyl-CoA
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** ribokinase
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* molecular weight:
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* ec number:
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** 1078.012   
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** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15]
 
* Synonym(s):
 
* Synonym(s):
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** (7Z,10Z,13Z,16Z)-docosa-7,10,13,16-tetraenoyl-CoA
 
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** (7Z,10Z,13Z,16Z)-docosatetraenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16081]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[CPD-10330]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-15318]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-16114]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 α-D-ribofuranose[c] '''=>''' 1 ADP[c] '''+''' 1 α-D-ribose 5-phosphate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_005840]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-01_005220]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[RIBOKIN-PWY]], ribose degradation: [http://metacyc.org/META/NEW-IMAGE?object=RIBOKIN-PWY RIBOKIN-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581112 71581112]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13697 13697]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73856 73856]
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** [http://www.genome.jp/dbget-bin/www_bget?R01051 R01051]
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{{#set: smiles=CCCCCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=LVXQCHCSSLFKLO-KPOVBLHLSA-J}}
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** [http://www.uniprot.org/uniprot/P44331 P44331]
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{{#set: common name=adrenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P36945 P36945]
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{{#set: molecular weight=1078.012    }}
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** [http://www.uniprot.org/uniprot/Q57849 Q57849]
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{{#set: common name=(7Z,10Z,13Z,16Z)-docosa-7,10,13,16-tetraenoyl-CoA|(7Z,10Z,13Z,16Z)-docosatetraenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9CF42 Q9CF42]
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{{#set: consumed by=RXN-16081}}
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** [http://www.uniprot.org/uniprot/P25332 P25332]
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{{#set: produced by=RXN-16114}}
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** [http://www.uniprot.org/uniprot/P0A9J6 P0A9J6]
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** [http://www.uniprot.org/uniprot/O93727 O93727]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ribokinase}}
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{{#set: ec number=EC-2.7.1.15}}
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{{#set: gene associated=Ec-07_005840|Ec-01_005220}}
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{{#set: in pathway=RIBOKIN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:04, 21 March 2018

Reaction RIBOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 α-D-ribofuranose[c] => 1 ADP[c] + 1 α-D-ribose 5-phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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