Difference between revisions of "Ec-27 004070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosp...")
(Created page with "Category:Gene == Gene Ec-27_004070 == * left end position: ** 3546837 * transcription direction: ** POSITIVE * right end position: ** 3548001 * centisome position: ** 54.9...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] ==
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== Gene Ec-27_004070 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3546837
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* common name:
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* transcription direction:
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** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
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** 3548001
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* centisome position:
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** 54.990513   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0441
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** Esi0000_0441
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4OH2OXOGLUTARALDOL-RXN]]
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** 1 [[HOMO-SER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 L-homoserine[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c]
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* Reaction: [[KDPGALDOL-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_003100]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXN-13990]]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-2221]]
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* [[PWY-7310]]
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* [[PWY-6507]]
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* [[GALACTUROCAT-PWY]]
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* [[ENTNER-DOUDOROFF-PWY]]
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* [[PWY-7562]]
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* [[HYDROXYPRODEG-PWY]]
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* [[PWY-7242]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3546837}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24923 24923]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3548001}}
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{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
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{{#set: centisome position=54.990513    }}
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{{#set: ec number=EC-4.4.1.1}}
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{{#set: common name=Esi_0000_0441|Esi0000_0441}}
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{{#set: gene associated=Ec-12_003100}}
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{{#set: reaction associated=4OH2OXOGLUTARALDOL-RXN|KDPGALDOL-RXN|RXN-13990}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-2221|PWY-7310|PWY-6507|GALACTUROCAT-PWY|ENTNER-DOUDOROFF-PWY|PWY-7562|HYDROXYPRODEG-PWY|PWY-7242}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:04, 21 March 2018

Gene Ec-27_004070

  • left end position:
    • 3546837
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3548001
  • centisome position:
    • 54.990513
  • Synonym(s):
    • Esi_0000_0441
    • Esi0000_0441

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004070&oldid=24375"