Difference between revisions of "2.4.1.223-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER-tRNAs SER-tRNAs] == * common name: ** a tRNAser * Synonym(s): ** a TRNA(SER) == Reaction(s...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acetylglucosaminylt...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER-tRNAs SER-tRNAs] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a tRNAser
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** acetylglucosaminyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.223 EC-2.4.1.223]
 
* Synonym(s):
 
* Synonym(s):
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** a TRNA(SER)
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[SERINE--TRNA-LIGASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein][c] '''=>''' 1 H+[c] '''+''' 1 α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein][c] '''+''' 1 UDP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-14_005460]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-15_002870]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-08_002720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-14_003840]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-02_004080]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-23_000390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-23_003230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a tRNAser}}
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* LIGAND-RXN:
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{{#set: common name=a TRNA(SER)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07397 R07397]
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{{#set: consumed by=SERINE--TRNA-LIGASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=acetylglucosaminyltransferase}}
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{{#set: ec number=EC-2.4.1.223}}
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{{#set: gene associated=Ec-14_005460|Ec-15_002870|Ec-08_002720|Ec-14_003840|Ec-02_004080|Ec-23_000390|Ec-23_003230}}
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{{#set: in pathway=PWY-6558}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:05, 21 March 2018

Reaction 2.4.1.223-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetylglucosaminyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-N-acetyl-α-D-glucosamine[c] + 1 β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein][c] => 1 H+[c] + 1 α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein][c] + 1 UDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
    • 1 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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