Difference between revisions of "RXN-9623"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBAMYUL-L-ASPARTATE CARBAMYUL-L-ASPARTATE] == * smiles: ** C(=O)([O-])CC(NC(N)=O)C([O-])=O *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9623 RXN-9623] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthetas...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBAMYUL-L-ASPARTATE CARBAMYUL-L-ASPARTATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9623 RXN-9623] ==
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* smiles:
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* direction:
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** C(=O)([O-])CC(NC(N)=O)C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HLKXYZVTANABHZ-REOHCLBHSA-L
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* common name:
 
* common name:
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** N-carbamoyl-L-aspartate
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** long chain acyl-coA synthetase
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* molecular weight:
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** long chain acyl-CoA synthetase
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** 174.113   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** carbamyul-L-aspartate
 
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** carbamyul-aspartate
 
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** carbamoyl-aspartate
 
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** carbamyl-aspartate
 
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** carbamyl-L-aspartate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[PALMITATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[AMP]][c]
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* [[ASPCARBTRANS-RXN]]
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* With common name(s):
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* [[DIHYDROOROT-RXN]]
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** 1 palmitate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 palmitoyl-CoA[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 16649-79-9
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* RHEA:
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* BIGG : 34984
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30754 30754]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460257 5460257]
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** [http://www.genome.jp/dbget-bin/www_bget?R01280 R01280]
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* HMDB : HMDB00828
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=long chain acyl-coA synthetase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00438 C00438]
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{{#set: common name=long chain acyl-CoA synthetase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-6.2.1.3}}
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** [http://www.chemspider.com/Chemical-Structure.10718031.html 10718031]
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{{#set: gene associated=Ec-12_008720|Ec-01_001560|Ec-02_006430|Ec-03_003710}}
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* CHEBI:
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{{#set: in pathway=PWY-5972|PWY-5971}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=32814 32814]
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{{#set: reconstruction category=orthology|annotation}}
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* METABOLIGHTS : MTBLC32814
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: smiles=C(=O)([O-])CC(NC(N)=O)C([O-])=O}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=HLKXYZVTANABHZ-REOHCLBHSA-L}}
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{{#set: common name=N-carbamoyl-L-aspartate}}
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{{#set: molecular weight=174.113    }}
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{{#set: common name=carbamyul-L-aspartate|carbamyul-aspartate|carbamoyl-aspartate|carbamyl-aspartate|carbamyl-L-aspartate}}
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{{#set: reversible reaction associated=ASPCARBTRANS-RXN|DIHYDROOROT-RXN}}
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Latest revision as of 19:05, 21 March 2018

Reaction RXN-9623

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 palmitate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 diphosphate[c] + 1 palmitoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5972, stearate biosynthesis I (animals and fungi): PWY-5972
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway

Reconstruction information

External links





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