Difference between revisions of "3.1.26.4-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NONAPRENYL-4-HYDROXYBENZOATE NONAPRENYL-4-HYDROXYBENZOATE] == * smiles: ** CC(=CCCC(=CCCC(=CCCC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA-DNA hybrid ribonu...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NONAPRENYL-4-HYDROXYBENZOATE NONAPRENYL-4-HYDROXYBENZOATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] ==
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* smiles:
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* direction:
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** CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(=C(O)C=CC(C(=O)[O-])=C1))C)C)C)C)C)C)C)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=YKKKMRBEPIZPBH-XWEAJCOCSA-M
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* common name:
 
* common name:
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** 3-nonaprenyl-4-hydroxybenzoate
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** RNA-DNA hybrid ribonuclease
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* molecular weight:
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* ec number:
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** 750.178   
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** [http://enzyme.expasy.org/EC/3.1.26.4 EC-3.1.26.4]
 
* Synonym(s):
 
* Synonym(s):
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** 3-solanesyl-4-hydroxybenzoate
 
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** nonaprenyl-4-hydroxybenzoic acid
 
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** 3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaenyl ester
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[2.5.1.39-RXN]]
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** n [[WATER]][c] '''+''' 1 [[RNA-DNA-hybrids]][c] '''=>''' 1 [[DNA-Holder]][c] '''+''' n [[Nucleoside-Monophosphates]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** n H2O[c] '''+''' 1 a RNA-DNA hybrid[c] '''=>''' 1 DNA[c] '''+''' n a nucleoside 5'-monophosphate[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-25_002560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-17_003740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-22_003570]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54746221 54746221]
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** [http://www.uniprot.org/uniprot/P52975 P52975]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=84502 84502]
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** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
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** [http://www.genome.jp/dbget-bin/www_bget?C03885 C03885]
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** [http://www.uniprot.org/uniprot/P43807 P43807]
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* HMDB : HMDB32488
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** [http://www.uniprot.org/uniprot/P43808 P43808]
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{{#set: smiles=CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(=C(O)C=CC(C(=O)[O-])=C1))C)C)C)C)C)C)C)C)C}}
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** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
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{{#set: inchi key=InChIKey=YKKKMRBEPIZPBH-XWEAJCOCSA-M}}
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** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
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{{#set: common name=3-nonaprenyl-4-hydroxybenzoate}}
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** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
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{{#set: molecular weight=750.178    }}
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** [http://www.uniprot.org/uniprot/Q57599 Q57599]
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{{#set: common name=3-solanesyl-4-hydroxybenzoate|nonaprenyl-4-hydroxybenzoic acid|3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaenyl ester}}
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** [http://www.uniprot.org/uniprot/O44114 O44114]
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{{#set: produced by=2.5.1.39-RXN}}
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** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
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** [http://www.uniprot.org/uniprot/P10442 P10442]
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** [http://www.uniprot.org/uniprot/P13319 P13319]
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** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
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** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
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** [http://www.uniprot.org/uniprot/Q04740 Q04740]
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** [http://www.uniprot.org/uniprot/Q49050 Q49050]
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** [http://www.uniprot.org/uniprot/O69014 O69014]
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** [http://www.uniprot.org/uniprot/Q54222 Q54222]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=RNA-DNA hybrid ribonuclease}}
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{{#set: ec number=EC-3.1.26.4}}
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{{#set: gene associated=Ec-25_002560|Ec-17_003740|Ec-22_003570}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:05, 21 March 2018

Reaction 3.1.26.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA-DNA hybrid ribonuclease
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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