Difference between revisions of "PWY3O-355"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** Tryptophan synthase beta subunit-like PLP-dependent enzyme
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** stearate biosynthesis III (fungi)
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** L-threonine ammonia-lyase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.3.1.19 EC-4.3.1.19]
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* Synonym(s):
 
* Synonym(s):
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** fatty acid biosynthesis
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** stearic acid biosynthesis
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** octadecanoate biosynthesis
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** saturated fatty acid biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
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** 1 [[THR]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
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* [[RXN-9633]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 L-threonine[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
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*** [[Ec-01_007100]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-9634]]
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* Gene: [[Ec-03_001910]]
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** 0 associated gene:
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* Gene: [[Ec-06_007490]]
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* [[RXN3O-1803]]
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** Source: [[annotation-esiliculosus_genome]]
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** 4 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Ec-27_003480]]
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** Source: [[orthology-aragem]]
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*** [[Ec-27_002090]]
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== Pathways  ==
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*** [[Ec-12_000650]]
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* [[PWY66-428]], L-threonine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-428 PWY66-428]
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*** [[Ec-12_000640]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[orthology]]
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*** [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Reaction(s) not found ==
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5293 RXN3O-5293]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5304 RXN3O-5304]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22108 22108]
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{{#set: common name=stearate biosynthesis III (fungi)}}
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* LIGAND-RXN:
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{{#set: common name=fatty acid biosynthesis|stearic acid biosynthesis|octadecanoate biosynthesis|saturated fatty acid biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00996 R00996]
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{{#set: reaction found=3}}
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* UNIPROT:
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/P25306 P25306]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/Q04513 Q04513]
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** [http://www.uniprot.org/uniprot/P37946 P37946]
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** [http://www.uniprot.org/uniprot/Q9JZW1 Q9JZW1]
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** [http://www.uniprot.org/uniprot/Q02145 Q02145]
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** [http://www.uniprot.org/uniprot/P66897 P66897]
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** [http://www.uniprot.org/uniprot/Q9WYJ1 Q9WYJ1]
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** [http://www.uniprot.org/uniprot/Q9PP95 Q9PP95]
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** [http://www.uniprot.org/uniprot/P25379 P25379]
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** [http://www.uniprot.org/uniprot/P00927 P00927]
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** [http://www.uniprot.org/uniprot/P20506 P20506]
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** [http://www.uniprot.org/uniprot/P0AGF6 P0AGF6]
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** [http://www.uniprot.org/uniprot/P04968 P04968]
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** [http://www.uniprot.org/uniprot/P20132 P20132]
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** [http://www.uniprot.org/uniprot/P09367 P09367]
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** [http://www.uniprot.org/uniprot/Q9RWU8 Q9RWU8]
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** [http://www.uniprot.org/uniprot/Q9JUX5 Q9JUX5]
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** [http://www.uniprot.org/uniprot/Q9ZD93 Q9ZD93]
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** [http://www.uniprot.org/uniprot/P31212 P31212]
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** [http://www.uniprot.org/uniprot/P36007 P36007]
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** [http://www.uniprot.org/uniprot/P73375 P73375]
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** [http://www.uniprot.org/uniprot/Q9T0D1 Q9T0D1]
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** [http://www.uniprot.org/uniprot/Q39469 Q39469]
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** [http://www.uniprot.org/uniprot/Q93968 Q93968]
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** [http://www.uniprot.org/uniprot/Q9XAA4 Q9XAA4]
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** [http://www.uniprot.org/uniprot/O94634 O94634]
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** [http://www.uniprot.org/uniprot/O59791 O59791]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
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{{#set: common name=L-threonine ammonia-lyase}}
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{{#set: ec number=EC-4.3.1.19}}
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{{#set: gene associated=Ec-03_001910|Ec-06_007490}}
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{{#set: in pathway=PWY66-428}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:05, 21 March 2018

Pathway PWY3O-355

  • taxonomic range:
  • common name:
    • stearate biosynthesis III (fungi)
  • Synonym(s):
    • fatty acid biosynthesis
    • stearic acid biosynthesis
    • octadecanoate biosynthesis
    • saturated fatty acid biosynthesis

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY3O-355&oldid=24465"