Difference between revisions of "Ec-14 004260"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17116 RXN-17116] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Ec-14_004260 == * left end position: ** 3966380 * transcription direction: ** POSITIVE * right end position: ** 3978122 * centisome position: ** 60.4...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17116 RXN-17116] ==
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== Gene Ec-14_004260 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3966380
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** POSITIVE
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* right end position:
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** 3978122
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* centisome position:
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** 60.459167   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0099_0047
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** Esi0099_0047
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** SHMT2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLYOHMETRANS-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-18494]][c] '''=>''' 1 [[CPD-17365]][c] '''+''' 1 [[ACETYL-COA]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 coenzyme A[c] '''+''' 1 3-oxo-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
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* Reaction: [[RXN0-5234]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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* [[PWY-2161]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-1622]]
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== Reconstruction information  ==
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* [[PWY-3841]]
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* [[annotation]]:
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* [[1CMET2-PWY]]
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** [[pathwaytools]]:
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* [[PWY-3661]]
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*** [[esiliculosus_genome]]
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* [[GLYSYN-PWY]]
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* [[PWY-5497]]
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* [[PWY-2201]]
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* [[PWY-181]]
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* [[PWY-3661-1]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3966380}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: in pathway=PWY-7726}}
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{{#set: right end position=3978122}}
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{{#set: reconstruction category=annotation}}
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{{#set: centisome position=60.459167    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=Esi_0099_0047|Esi0099_0047|SHMT2}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: reaction associated=GLYOHMETRANS-RXN|RXN0-5234}}
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}

Latest revision as of 20:05, 21 March 2018

Gene Ec-14_004260

  • left end position:
    • 3966380
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3978122
  • centisome position:
    • 60.459167
  • Synonym(s):
    • Esi_0099_0047
    • Esi0099_0047
    • SHMT2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_004260&oldid=24478"