Difference between revisions of "Ec-14 004260"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Gene == Gene Ec-14_004260 == * left end position: ** 3966380 * transcription direction: ** POSITIVE * right end position: ** 3978122 * centisome position: ** 60.4...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] ==
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== Gene Ec-14_004260 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 3966380
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* common name:
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* transcription direction:
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** TCA cycle VII (acetate-producers)
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** POSITIVE
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* right end position:
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** 3978122
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* centisome position:
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** 60.459167   
 
* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
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** Esi_0099_0047
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** citric acid cycle
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** Esi0099_0047
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** Krebs cycle
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** SHMT2
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** Szent-Gyorgyi-Krebs cycle
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== Reaction(s) found ==
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== Reactions associated ==
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'''7''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[GLYOHMETRANS-RXN]]
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* [[2OXOGLUTARATEDEH-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 3 associated gene(s):
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*** Assignment: go-term
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*** [[Ec-21_002300]]
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* Reaction: [[RXN0-5234]]
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*** [[Ec-27_004160]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-25_000020]]
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*** Assignment: automated-name-match
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** 1 reconstruction source(s) associated:
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== Pathways associated ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-2161]]
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* [[ACONITATEDEHYDR-RXN]]
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* [[PWY-1622]]
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** 2 associated gene(s):
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* [[PWY-3841]]
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*** [[Ec-16_001000]]
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* [[1CMET2-PWY]]
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*** [[Ec-12_000170]]
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* [[PWY-3661]]
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** 1 reconstruction source(s) associated:
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* [[GLYSYN-PWY]]
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-5497]]
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* [[ACONITATEHYDR-RXN]]
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* [[PWY-2201]]
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** 2 associated gene(s):
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* [[PWY-181]]
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*** [[Ec-12_000170]]
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* [[PWY-3661-1]]
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*** [[Ec-16_001000]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[CITSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-23_003460]]
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*** [[Ec-25_001360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ISOCITDEH-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_003080]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-14971]]
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** 6 associated gene(s):
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*** [[Ec-07_007310]]
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*** [[Ec-27_006560]]
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*** [[Ec-07_002870]]
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*** [[Ec-11_000360]]
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*** [[Ec-05_003640]]
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*** [[Ec-21_003470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8807 RXN-8807]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: left end position=3966380}}
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{{#set: common name=TCA cycle VII (acetate-producers)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
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{{#set: right end position=3978122}}
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{{#set: reaction found=7}}
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{{#set: centisome position=60.459167    }}
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{{#set: total reaction=9}}
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{{#set: common name=Esi_0099_0047|Esi0099_0047|SHMT2}}
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{{#set: completion rate=78.0}}
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{{#set: reaction associated=GLYOHMETRANS-RXN|RXN0-5234}}
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}

Latest revision as of 20:05, 21 March 2018

Gene Ec-14_004260

  • left end position:
    • 3966380
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3978122
  • centisome position:
    • 60.459167
  • Synonym(s):
    • Esi_0099_0047
    • Esi0099_0047
    • SHMT2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_004260&oldid=24478"