Difference between revisions of "Ec-22 002520"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** uroporphyrino...")
(Created page with "Category:Gene == Gene Ec-22_002520 == * left end position: ** 2796258 * transcription direction: ** NEGATIVE * right end position: ** 2804354 * centisome position: ** 61.9...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
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== Gene Ec-22_002520 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2796258
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* common name:
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* transcription direction:
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** uroporphyrinogen synthase, putative chloroplast precursor
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.75 EC-4.2.1.75]
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** 2804354
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* centisome position:
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** 61.92095   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0091_0038
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** Esi0091_0038
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** SAMDC
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[SAMDECARB-RXN]]
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** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c]
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* With common name(s):
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** 1 preuroporphyrinogen[c] '''=>''' 1 H2O[c] '''+''' 1 uroporphyrinogen-III[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_004890]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[BSUBPOLYAMSYN-PWY]]
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* [[ARGSPECAT-PWY]]
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* [[PWY-6834]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2796258}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2804354}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
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{{#set: centisome position=61.92095    }}
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* UNIPROT:
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{{#set: common name=Esi_0091_0038|Esi0091_0038|SAMDC}}
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** [http://www.uniprot.org/uniprot/P10746 P10746]
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{{#set: reaction associated=SAMDECARB-RXN}}
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** [http://www.uniprot.org/uniprot/P51163 P51163]
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{{#set: pathway associated=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}}
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** [http://www.uniprot.org/uniprot/P21248 P21248]
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** [http://www.uniprot.org/uniprot/Q58401 Q58401]
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** [http://www.uniprot.org/uniprot/P09126 P09126]
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** [http://www.uniprot.org/uniprot/Q59294 Q59294]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=uroporphyrinogen synthase, putative chloroplast precursor}}
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{{#set: ec number=EC-4.2.1.75}}
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{{#set: gene associated=Ec-12_004890}}
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{{#set: in pathway=PWY-5189|PWY-5188}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:05, 21 March 2018

Gene Ec-22_002520

  • left end position:
    • 2796258
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2804354
  • centisome position:
    • 61.92095
  • Synonym(s):
    • Esi_0091_0038
    • Esi0091_0038
    • SAMDC

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-22_002520&oldid=24502"