Difference between revisions of "Ec-08 003020"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ceramidase * ec n...")
 
(Created page with "Category:Gene == Gene Ec-08_003020 == * left end position: ** 2878888 * transcription direction: ** NEGATIVE * right end position: ** 2885810 * centisome position: ** 42.9...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] ==
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== Gene Ec-08_003020 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2878888
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* common name:
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* transcription direction:
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** Ceramidase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
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** 2885810
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* centisome position:
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** 42.9873   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0281_0043
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** Esi0281_0043
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[IGPSYN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[N-Acylsphingosine]][c] '''=>''' 1 [[Fatty-Acids]][c] '''+''' 1 [[SPHINGOSINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 a (4E)-sphing-4-enine ceramide[c] '''=>''' 1 a fatty acid[c] '''+''' 1 sphingosine[c]
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* Reaction: [[PRAISOM-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-26_006010]]
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== Pathways associated ==
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** ESILICULOSUS_GENOME
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* [[TRPSYN-PWY]]
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2878888}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20856 20856]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2885810}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01493 R01493]
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{{#set: centisome position=42.9873    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0281_0043|Esi0281_0043}}
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{{#set: common name=Ceramidase}}
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{{#set: reaction associated=IGPSYN-RXN|PRAISOM-RXN}}
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{{#set: ec number=EC-3.5.1.23}}
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{{#set: pathway associated=TRPSYN-PWY}}
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{{#set: gene associated=Ec-26_006010}}
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{{#set: in pathway=PWY3DJ-11470}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:06, 21 March 2018

Gene Ec-08_003020

  • left end position:
    • 2878888
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2885810
  • centisome position:
    • 42.9873
  • Synonym(s):
    • Esi_0281_0043
    • Esi0281_0043

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_003020&oldid=24508"