Difference between revisions of "4.99.1.3-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.99.1.3-RXN 4.99.1.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** sirohydrochlorin coba...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.99.1.3-RXN 4.99.1.3-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** mevalonate pathway II (archaea)
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** sirohydrochlorin cobaltochelatase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.99.1.3 EC-4.99.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** isoprenoid pathway
 
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** MVA pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[1.1.1.34-RXN]]
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** 1 [[SIROHYDROCHLORIN]][c] '''+''' 1 [[CO+2]][c] '''=>''' 1 [[COBALT-SIROHYDROCHLORIN]][c] '''+''' 2 [[PROTON]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-03_000580]]
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** 1 sirohydrochlorin[c] '''+''' 1 Co2+[c] '''=>''' 1 cobalt-sirohydrochlorin[c] '''+''' 2 H+[c]
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*** [[Ec-03_000570]]
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*** [[Ec-08_002990]]
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== Genes associated with this reaction  ==
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*** [[Ec-27_005710]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-10_002430]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: GO-TERM
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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== Pathways  ==
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** 3 associated gene(s):
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* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
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*** [[Ec-26_003940]]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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*** [[Ec-24_000870]]
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== Reconstruction information  ==
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*** [[Ec-22_002850]]
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* Category: [[annotation]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-aragem]]
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* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-19_002030]]
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*** [[Ec-21_004360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[IPPISOM-RXN]]
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** 2 associated gene(s):
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*** [[Ec-11_001030]]
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*** [[Ec-18_002690]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[MEVALONATE-KINASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-26_004370]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10067 RXN-10067]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10068 RXN-10068]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2157}}
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* RHEA:
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{{#set: common name=mevalonate pathway II (archaea)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15893 15893]
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{{#set: common name=isoprenoid pathway|MVA pathway}}
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* LIGAND-RXN:
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{{#set: reaction found=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05807 R05807]
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{{#set: total reaction=7}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=71.0}}
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{{#set: common name=sirohydrochlorin cobaltochelatase}}
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{{#set: ec number=EC-4.99.1.3}}
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{{#set: gene associated=Ec-10_002430}}
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{{#set: in pathway=PWY-7377}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:06, 21 March 2018

Reaction 4.99.1.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sirohydrochlorin cobaltochelatase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): PWY-7377
    • 3 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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