Difference between revisions of "RXN-1404"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-07_001420 == * left end position: ** 1604131 * transcription direction: ** POSITIVE * right end position: ** 1618731 * centisome position: ** 20.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-07_001420 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] ==
−
* left end position:
+
* direction:
−
** 1604131
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/3.5.5.1 EC-3.5.5.1]
−
* right end position:
+
−
** 1618731
+
−
* centisome position:
+
−
** 20.77236   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0045_0115
 
−
** Esi0045_0115
 
−
** CAT
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[CATAL-RXN]]
+
* With identifiers:
−
** Source: [[annotation-esiliculosus_genome]]
+
** 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
−
*** Assignment: ec-number
+
* With common name(s):
 +
** 1 indole-3-acetonitrile[c] '''+''' 2 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-01_002370]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-26_000350]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
−
* Reaction: [[RXN-14189]]
+
== Pathways  ==
−
** Source: [[annotation-esiliculosus_genome]]
+
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
−
*** Assignment: ec-number
+
** '''2''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5026 PWY-5026]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWYQT-4476]], indole glucosinolate breakdown (insect chewing induced): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476]
 +
** '''1''' reactions found over '''14''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
−
* Reaction: [[RXN66-1]]
+
*** Tool: [[pantograph]]
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: ec-number
+
−
== Pathways associated ==
+
−
* [[PWY-5506]]
+
−
* [[DETOX1-PWY-1]]
+
−
* [[DETOX1-PWY]]
+
−
* [[PWY66-162]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1604131}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
−
{{#set: right end position=1618731}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=20.77236    }}
+
{{#set: ec number=EC-3.5.5.1}}
−
{{#set: common name=Esi_0045_0115|Esi0045_0115|CAT}}
+
{{#set: gene associated=Ec-01_002370|Ec-26_000350}}
−
{{#set: reaction associated=CATAL-RXN|RXN-14189|RXN66-1}}
+
{{#set: in pathway=PWY-581|PWY-5026|PWYQT-4476}}
−
{{#set: pathway associated=PWY-5506|DETOX1-PWY-1|DETOX1-PWY|PWY66-162}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:06, 21 March 2018

Reaction RXN-1404

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 2 reactions found over 14 reactions in the full pathway
  • PWY-5026, indole-3-acetate biosynthesis V (bacteria and fungi): PWY-5026
    • 1 reactions found over 1 reactions in the full pathway
  • PWYQT-4476, indole glucosinolate breakdown (insect chewing induced): PWYQT-4476
    • 1 reactions found over 14 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-1404&oldid=24599"