Difference between revisions of "Ec-06 002940"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOMEVALONATE-KINASE-RXN PHOSPHOMEVALONATE-KINASE-RXN] == * direction: ** REVERSIBLE * common n...")
(Created page with "Category:Gene == Gene Ec-06_002940 == * left end position: ** 2289997 * transcription direction: ** POSITIVE * right end position: ** 2294993 * centisome position: ** 26.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOMEVALONATE-KINASE-RXN PHOSPHOMEVALONATE-KINASE-RXN] ==
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== Gene Ec-06_002940 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2289997
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* common name:
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* transcription direction:
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** GHMP kinase, C-terminal domain
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.4.2 EC-2.7.4.2]
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** 2294993
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* centisome position:
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** 26.148212   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0064_0105
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** Esi0064_0105
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.14.11.2-RXN]]
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** 1 [[CPD-499]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[CPD-641]][c] '''+''' 1 [[ADP]][c]
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* With common name(s):
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** 1 (R)-mevalonate 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 (R)-mevalonate diphosphate[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-25_002910]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2289997}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16341 16341]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2294993}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03245 R03245]
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{{#set: centisome position=26.148212    }}
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* UNIPROT:
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{{#set: common name=Esi_0064_0105|Esi0064_0105}}
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** [http://www.uniprot.org/uniprot/P24521 P24521]
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{{#set: reaction associated=1.14.11.2-RXN}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=GHMP kinase, C-terminal domain}}
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{{#set: ec number=EC-2.7.4.2}}
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{{#set: gene associated=Ec-25_002910}}
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{{#set: in pathway=PWY-922|PWY-7391}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:07, 21 March 2018

Gene Ec-06_002940

  • left end position:
    • 2289997
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2294993
  • centisome position:
    • 26.148212
  • Synonym(s):
    • Esi_0064_0105
    • Esi0064_0105

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_002940&oldid=24681"