Difference between revisions of "Ec-12 000410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5341 RXN-5341] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-glucosidase, family GH1...")
(Created page with "Category:Gene == Gene Ec-12_000410 == * left end position: ** 392477 * transcription direction: ** POSITIVE * right end position: ** 399190 * centisome position: ** 4.7081...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5341 RXN-5341] ==
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== Gene Ec-12_000410 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 392477
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* common name:
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* transcription direction:
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** Beta-glucosidase, family GH1
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** POSITIVE
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** Beta-glucosidase, family GH3
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* right end position:
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** Beta-glucosidase, family GH30
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** 399190
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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** 4.708188   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0069_0059
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** Esi0069_0059
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** MEP14
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4.2.2.10-RXN]]
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** 1 [[LINAMARIN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-HYDROXY-2-METHYLPROPANENITRILE]][c] '''+''' 1 [[Glucopyranose]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 linamarin[c] '''+''' 1 H2O[c] '''=>''' 1 acetone cyanohydrin[c] '''+''' 1 D-glucopyranose[c]
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* Reaction: [[RXN-14897]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_001850]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-04_002190]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-26_002410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-07_005240]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-20_004800]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-3121]], linamarin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3121 PWY-3121]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7091]], linustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7091 PWY-7091]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7243]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=392477}}
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{{#set: common name=Beta-glucosidase, family GH1}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Beta-glucosidase, family GH3}}
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{{#set: right end position=399190}}
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{{#set: common name=Beta-glucosidase, family GH30}}
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{{#set: centisome position=4.708188    }}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: common name=Esi_0069_0059|Esi0069_0059|MEP14}}
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{{#set: gene associated=Ec-07_001850|Ec-04_002190|Ec-26_002410|Ec-07_005240|Ec-20_004800}}
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{{#set: reaction associated=4.2.2.10-RXN|RXN-14897}}
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{{#set: in pathway=PWY-3121|PWY-7091}}
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{{#set: pathway associated=PWY-7243}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:07, 21 March 2018

Gene Ec-12_000410

  • left end position:
    • 392477
  • transcription direction:
    • POSITIVE
  • right end position:
    • 399190
  • centisome position:
    • 4.708188
  • Synonym(s):
    • Esi_0069_0059
    • Esi0069_0059
    • MEP14

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_000410&oldid=24706"