Difference between revisions of "P341-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN] == * direction: ** R...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
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** Bifunctional glycosyltransferase, family GT74 / family GT2
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** glycolysis V (Pyrococcus)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.69 EC-2.4.1.69]
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* Synonym(s):
 
* Synonym(s):
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** archaeal Embden-Meyerhof pathway
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** archaeal Embden-Meyerhof-Parnas pathway
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** archaeal EMP pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''9''' reactions in the full pathway
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** 1 [[GUANOSINE_DIPHOSPHATE_FUCOSE]][c] '''+''' 1 [[Lactotetraosylceramides]][c] '''<=>''' 1 [[III2-a-Fucosyllactotetraosylceramides]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 GDP-L-fucose[c] '''+''' 1 &beta;-D-galactosyl-(1&rarr;4)-N-acetyl-&beta;-D-glucosaminyl-(1&rarr;3)-&beta;-D-galactosyl-(1&rarr;4)-&beta;-D-glucosyl-(1&harr;1)-ceramide[c] '''<=>''' 1 III2-&alpha;-fucosyllactotetraosylceramide[c] '''+''' 1 GDP[c] '''+''' 1 H+[c]
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*** [[Ec-14_005400]]
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*** [[Ec-27_004000]]
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== Genes associated with this reaction  ==
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*** [[Ec-26_004120]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-10_003470]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***EC-NUMBER
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* [[3PGAREARR-RXN]]
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== Pathways  ==
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** 7 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-27_000330]]
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* Category: [[annotation]]
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*** [[Ec-24_002670]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-10_005410]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-03_002160]]
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*** [[Ec-03_002170]]
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*** [[Ec-01_000980]]
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*** [[Ec-06_009930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[F16ALDOLASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-10_004980]]
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*** [[Ec-01_008040]]
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*** [[Ec-10_000880]]
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*** [[Ec-14_001680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-06_006860]]
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*** [[Ec-12_000950]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
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*** [[Ec-24_002470]]
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*** [[Ec-13_003530]]
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*** [[Ec-13_003810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
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*** [[Ec-08_000500]]
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*** [[Ec-24_000360]]
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*** [[Ec-03_002790]]
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*** [[Ec-23_004160]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.6-RXN 1.2.7.6-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R302-RXN R302-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17001 RXN-17001]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32175 32175]
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{{#set: common name=glycolysis V (Pyrococcus)}}
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* LIGAND-RXN:
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{{#set: common name=archaeal Embden-Meyerhof pathway|archaeal Embden-Meyerhof-Parnas pathway|archaeal EMP pathway}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04081 R04081]
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{{#set: reaction found=6}}
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* UNIPROT:
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/P19526 P19526]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/Q10984 Q10984]
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** [http://www.uniprot.org/uniprot/Q10980 Q10980]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Bifunctional glycosyltransferase, family GT74 / family GT2}}
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{{#set: ec number=EC-2.4.1.69}}
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{{#set: gene associated=Ec-10_003470}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:07, 21 March 2018

Pathway P341-PWY

  • taxonomic range:
  • common name:
    • glycolysis V (Pyrococcus)
  • Synonym(s):
    • archaeal Embden-Meyerhof pathway
    • archaeal Embden-Meyerhof-Parnas pathway
    • archaeal EMP pathway

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=P341-PWY&oldid=24725"