Difference between revisions of "1.14.11.18-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phytanoyl-CoA dio...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6955 PWY-6955] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** lincomycin biosynthesis
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** Phytanoyl-CoA dioxygenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.11.18 EC-1.14.11.18]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[RXN-5861]]
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** 1 [[CPD-206]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[2-HYDROXYPHYTANOYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12851 RXN-12851]
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** 1 phytanoyl-CoA[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 2-hydroxyphytanoyl-CoA[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12852 RXN-12852]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12854 RXN-12854]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12855 RXN-12855]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12859 RXN-12859]
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* Gene: [[Ec-22_003660]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12860 RXN-12860]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=STIZOLOBINATE-SYNTHASE-RXN STIZOLOBINATE-SYNTHASE-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_011990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-23_003040]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=lincomycin biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16065 16065]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: reaction not found=8}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05722 R05722]
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{{#set: completion rate=13.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phytanoyl-CoA dioxygenase}}
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{{#set: ec number=EC-1.14.11.18}}
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{{#set: gene associated=Ec-22_003660|Ec-01_011990|Ec-01_001740|Ec-23_003040}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:08, 21 March 2018

Reaction 1.14.11.18-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phytanoyl-CoA dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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