Difference between revisions of "Ec-16 002070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate ki...")
(Created page with "Category:Gene == Gene Ec-16_002070 == * left end position: ** 2271718 * transcription direction: ** NEGATIVE * right end position: ** 2274529 * centisome position: ** 42.5...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] ==
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== Gene Ec-16_002070 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2271718
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* common name:
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* transcription direction:
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** nucleoside diphosphate kinase
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** NEGATIVE
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** Nucleoside diphosphate kinase
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* right end position:
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* ec number:
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** 2274529
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* centisome position:
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** 42.560234   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0047_0061
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** Esi0047_0061
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[GDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GTP]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 GDP[c] '''+''' 1 ATP[c] '''=>''' 1 GTP[c] '''+''' 1 ADP[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***GO-TERM
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* Reaction: [[RXN-10711]]
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* [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***GO-TERM
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* Reaction: [[RXN-10767]]
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* [[Ec-04_001140]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***GO-TERM
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* Reaction: [[RXN-12252]]
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** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-11_005170]]
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*** Assignment: automated-name-match
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-12575]]
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***GO-TERM
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-07_000140]]
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*** Assignment: automated-name-match
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** ESILICULOSUS_GENOME
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* Reaction: [[RXNQT-4366]]
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***GO-TERM
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* [[Ec-11_004330]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-22_003280]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2271718}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27686 27686]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2274529}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00330 R00330]
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{{#set: centisome position=42.560234    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0047_0061|Esi0047_0061}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-26_003930|Ec-03_001380|Ec-04_001140|Ec-11_005170|Ec-07_000140|Ec-11_004330|Ec-22_003280}}
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{{#set: in pathway=PWY-7221|PPGPPMET-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:08, 21 March 2018

Gene Ec-16_002070

  • left end position:
    • 2271718
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2274529
  • centisome position:
    • 42.560234
  • Synonym(s):
    • Esi_0047_0061
    • Esi0047_0061

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_002070&oldid=24826"