Difference between revisions of "CYSTATHIONINE-BETA-SYNTHASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA ligase/cyclic nuc...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] == * direction: ** REVERSIBLE * co...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** RNA ligase/cyclic nucleotide phosphodiesterase
+
** Cystathionine beta-synthase
−
** 3',5'-cyclic-nucleotide phosphodiesterase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.4.17 EC-3.1.4.17]
+
** [http://enzyme.expasy.org/EC/4.2.1.22 EC-4.2.1.22]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Cyclic-3-5-Nucleoside-Monophosphates]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[HOMO-CYS]][c] '''+''' 1 [[SER]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a nucleoside cyclic 3',5'-monophosphate[c] '''=>''' 1 a nucleoside 5'-monophosphate[c] '''+''' 1 H+[c]
+
** 1 L-homocysteine[c] '''+''' 1 L-serine[c] '''<=>''' 1 L-cystathionine[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-20_000300]]
+
* Gene: [[Ec-16_002870]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-20_002540]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-14_005050]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-01_000990]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14653 14653]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10112 10112]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01290 R01290]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P12019 P12019]
+
** [http://www.uniprot.org/uniprot/P32232 P32232]
−
** [http://www.uniprot.org/uniprot/Q56686 Q56686]
+
** [http://www.uniprot.org/uniprot/P32582 P32582]
−
** [http://www.uniprot.org/uniprot/P14099 P14099]
+
** [http://www.uniprot.org/uniprot/P35520 P35520]
−
** [http://www.uniprot.org/uniprot/Q01066 Q01066]
+
** [http://www.uniprot.org/uniprot/Q9YCN5 Q9YCN5]
−
** [http://www.uniprot.org/uniprot/Q01061 Q01061]
+
** [http://www.uniprot.org/uniprot/Q12633 Q12633]
−
** [http://www.uniprot.org/uniprot/P14100 P14100]
+
** [http://www.uniprot.org/uniprot/P72662 P72662]
−
** [http://www.uniprot.org/uniprot/Q01065 Q01065]
+
** [http://www.uniprot.org/uniprot/O59701 O59701]
−
** [http://www.uniprot.org/uniprot/P27815 P27815]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/O66909 O66909]
+
{{#set: common name=Cystathionine beta-synthase}}
−
** [http://www.uniprot.org/uniprot/P14270 P14270]
+
{{#set: ec number=EC-4.2.1.22}}
−
** [http://www.uniprot.org/uniprot/O27755 O27755]
+
{{#set: gene associated=Ec-16_002870}}
−
** [http://www.uniprot.org/uniprot/P44685 P44685]
+
{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-801}}
−
** [http://www.uniprot.org/uniprot/P22434 P22434]
+
−
** [http://www.uniprot.org/uniprot/P0AEW4 P0AEW4]
+
−
** [http://www.uniprot.org/uniprot/O26280 O26280]
+
−
** [http://www.uniprot.org/uniprot/O06629 O06629]
+
−
** [http://www.uniprot.org/uniprot/O30241 O30241]
+
−
** [http://www.uniprot.org/uniprot/P14644 P14644]
+
−
** [http://www.uniprot.org/uniprot/P54748 P54748]
+
−
** [http://www.uniprot.org/uniprot/Q13945 Q13945]
+
−
** [http://www.uniprot.org/uniprot/Q01062 Q01062]
+
−
** [http://www.uniprot.org/uniprot/P54827 P54827]
+
−
** [http://www.uniprot.org/uniprot/Q01064 Q01064]
+
−
** [http://www.uniprot.org/uniprot/Q9NP56 Q9NP56]
+
−
** [http://www.uniprot.org/uniprot/O60658 O60658]
+
−
** [http://www.uniprot.org/uniprot/P36599 P36599]
+
−
** [http://www.uniprot.org/uniprot/P30645 P30645]
+
−
** [http://www.uniprot.org/uniprot/Q45859 Q45859]
+
−
** [http://www.uniprot.org/uniprot/P12252 P12252]
+
−
** [http://www.uniprot.org/uniprot/P06776 P06776]
+
−
** [http://www.uniprot.org/uniprot/Q08493 Q08493]
+
−
** [http://www.uniprot.org/uniprot/Q63421 Q63421]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=RNA ligase/cyclic nucleotide phosphodiesterase}}
+
−
{{#set: common name=3',5'-cyclic-nucleotide phosphodiesterase}}
+
−
{{#set: ec number=EC-3.1.4.17}}
+
−
{{#set: gene associated=Ec-20_000300|Ec-20_002540|Ec-14_005050|Ec-01_000990}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:09, 21 March 2018

Reaction CYSTATHIONINE-BETA-SYNTHASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Cystathionine beta-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-homocysteine[c] + 1 L-serine[c] <=> 1 L-cystathionine[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOCYSDEGR-PWY, L-cysteine biosynthesis III (from L-homocysteine): HOMOCYSDEGR-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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