Difference between revisions of "TYRFUMCAT-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
** glyoxylate cycle
+
** L-tyrosine degradation I
 
* Synonym(s):
 
* Synonym(s):
** glyoxylate bypass
+
** tyrosine fumarate catabolism
** glyoxylate shunt
+
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''6''' reactions found over '''6''' reactions in the full pathway
+
  '''3''' reactions found over '''5''' reactions in the full pathway
* [[ACONITATEDEHYDR-RXN]]
+
* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
** 2 associated gene(s):
+
*** [[Ec-16_001000]]
+
*** [[Ec-12_000170]]
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-esiliculosus_genome]]
+
* [[ACONITATEHYDR-RXN]]
+
** 2 associated gene(s):
+
*** [[Ec-12_000170]]
+
*** [[Ec-16_001000]]
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-esiliculosus_genome]]
+
* [[CITSYN-RXN]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-esiliculosus_genome]]
+
* [[ISOCIT-CLEAV-RXN]]
+
 
** 1 associated gene(s):
 
** 1 associated gene(s):
*** [[Ec-12_007550]]
+
*** [[Ec-23_003630]]
** 1 reconstruction source(s) associated:
+
*** [[annotation-esiliculosus_genome]]
+
* [[MALATE-DEH-RXN]]
+
** 2 associated gene(s):
+
*** [[Ec-10_006200]]
+
*** [[Ec-02_003100]]
+
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
* [[MALSYN-RXN]]
+
* [[HOMOGENTISATE-12-DIOXYGENASE-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
*** [[Ec-12_003860]]
+
*** [[Ec-17_003830]]
** 2 reconstruction source(s) associated:
+
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
*** [[orthology-aragem]]
+
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=FUMARYLACETOACETASE-RXN FUMARYLACETOACETASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=MALEYLACETOACETATE-ISOMERASE-RXN MALEYLACETOACETATE-ISOMERASE-RXN]
 
== External links  ==
 
== External links  ==
* ECOCYC:
+
* UM-BBD-PWY : tyr
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
+
{{#set: taxonomic range=TAX-1224}}
* METACYC:
+
{{#set: taxonomic range=TAX-4751}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
+
{{#set: taxonomic range=TAX-40674}}
{{#set: taxonomic range=TAX-2157}}
+
{{#set: common name=L-tyrosine degradation I}}
{{#set: taxonomic range=TAX-2759}}
+
{{#set: common name=tyrosine fumarate catabolism}}
{{#set: taxonomic range=TAX-2}}
+
{{#set: reaction found=3}}
{{#set: common name=glyoxylate cycle}}
+
{{#set: total reaction=5}}
{{#set: common name=glyoxylate bypass|glyoxylate shunt}}
+
{{#set: completion rate=60.0}}
{{#set: reaction found=6}}
+
{{#set: total reaction=6}}
+
{{#set: completion rate=100.0}}
+

Latest revision as of 19:09, 21 March 2018

Pathway TYRFUMCAT-PWY

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : tyr