Difference between revisions of "PWY-1861"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6268 RXN-6268] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6268 RXN-6268] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** formaldehyde assimilation II (RuMP Cycle)
 
* Synonym(s):
 
* Synonym(s):
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** ribulose monophosphate cycle
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** formaldehyde assimilation
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** RuMP pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''9''' reactions in the full pathway
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** 1 [[BETAINE-ALDEHYDE-HYDRATE]][c] '''<=>''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[WATER]][c]
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* [[1TRANSKETO-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 betaine aldehyde hydrate[c] '''<=>''' 1 betaine aldehyde[c] '''+''' 1 H2O[c]
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*** [[Ec-20_002600]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** [[orthology-aragem]]
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* [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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* [[2TRANSKETO-RXN]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** 1 associated gene(s):
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* [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494]
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*** [[Ec-20_002600]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[6PFRUCTPHOS-RXN]]
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*** Tool: [[pathwaytools]]
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** 3 associated gene(s):
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*** [[Ec-14_003880]]
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*** [[Ec-22_000070]]
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*** [[Ec-12_002540]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[F16ALDOLASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-10_004980]]
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*** [[Ec-01_008040]]
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*** [[Ec-10_000880]]
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*** [[Ec-14_001680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RIB5PISOM-RXN]]
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** 1 associated gene(s):
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*** [[Ec-08_003540]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RIBULP3EPIM-RXN]]
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** 2 associated gene(s):
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*** [[Ec-07_002390]]
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*** [[Ec-27_003930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[TRANSALDOL-RXN]]
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** 2 associated gene(s):
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*** [[Ec-06_003940]]
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*** [[Ec-01_002780]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R10-RXN R10-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R12-RXN R12-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=PWY1F-353|PWY-7494}}
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{{#set: common name=formaldehyde assimilation II (RuMP Cycle)}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=ribulose monophosphate cycle|formaldehyde assimilation|RuMP pathway}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reaction found=7}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: total reaction=9}}
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{{#set: completion rate=78.0}}

Latest revision as of 19:09, 21 March 2018

Pathway PWY-1861

  • taxonomic range:
  • common name:
    • formaldehyde assimilation II (RuMP Cycle)
  • Synonym(s):
    • ribulose monophosphate cycle
    • formaldehyde assimilation
    • RuMP pathway

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-1861&oldid=24888"