Difference between revisions of "PWY66-391"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate ki...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPKIN-RXN GDPKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
 
* common name:
 
* common name:
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** nucleoside diphosphate kinase
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** fatty acid β-oxidation VI (peroxisome)
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** Nucleoside diphosphate kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''7''' reactions in the full pathway
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** 1 [[GDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GTP]][c]
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* [[ACYLCOASYN-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 GDP[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 GTP[c]
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*** [[Ec-03_003710]]
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*** [[Ec-01_001560]]
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== Genes associated with this reaction  ==
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*** [[Ec-12_008720]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-02_006430]]
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* Gene: [[Ec-11_005170]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* [[ENOYL-COA-HYDRAT-RXN]]
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* Gene: [[Ec-03_001380]]
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** 4 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-14_006530]]
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*** Assignment: GO-TERM
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*** [[Ec-06_001380]]
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* Gene: [[Ec-22_003280]]
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*** [[Ec-16_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-16_001250]]
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*** Assignment: GO-TERM
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-11_004330]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[OHACYL-COA-DEHYDROG-RXN]]
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*** Assignment: EC-NUMBER
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** 2 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-14_006530]]
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* Gene: [[Ec-26_003930]]
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*** [[Ec-19_005290]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-07_000140]]
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* [[RXN-11026]]
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** Source: [[annotation-esiliculosus_genome]]
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** 3 associated gene(s):
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*** Assignment: GO-TERM
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*** [[Ec-22_002920]]
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* Gene: [[Ec-04_001140]]
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*** [[Ec-08_006390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_004320]]
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*** Assignment: GO-TERM
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
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* [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7699 RXN-7699]
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-485 RXN66-485]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-7742}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27686 27686]
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{{#set: common name=fatty acid β-oxidation VI (peroxisome)}}
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* LIGAND-RXN:
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{{#set: reaction found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00330 R00330]
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{{#set: total reaction=7}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=57.0}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-11_005170|Ec-03_001380|Ec-22_003280|Ec-11_004330|Ec-26_003930|Ec-07_000140|Ec-04_001140}}
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{{#set: in pathway=PWY-7221|PPGPPMET-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:09, 21 March 2018

Pathway PWY66-391

  • taxonomic range:
  • common name:
    • fatty acid β-oxidation VI (peroxisome)
  • Synonym(s):

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY66-391&oldid=24943"