Difference between revisions of "Ec-07 005560"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7659 RXN-7659] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranylgeranyl reductase * Sy...")
 
(Created page with "Category:Gene == Gene Ec-07_005560 == * left end position: ** 5410697 * transcription direction: ** POSITIVE * right end position: ** 5422566 * centisome position: ** 70.0...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7659 RXN-7659] ==
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== Gene Ec-07_005560 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5410697
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* common name:
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* transcription direction:
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** Geranylgeranyl reductase
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** POSITIVE
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* right end position:
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** 5422566
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* centisome position:
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** 70.0647   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0476_0015
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** Esi0476_0015
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTAMATE-N-ACETYLTRANSFERASE-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7002]][c] '''=>''' 1 [[CPD-7003]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 dihydrogeranylgeranyl diphosphate[c] '''=>''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''+''' 1 NADP+[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[N-ACETYLTRANSFER-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: automated-name-match
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* [[Ec-03_003520]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[PWY-5154]]
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== Pathways  ==
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* [[GLUTORN-PWY]]
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* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
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* [[ARGSYNBSUB-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=5410697}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08755 R08755]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5422566}}
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{{#set: common name=Geranylgeranyl reductase}}
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{{#set: centisome position=70.0647    }}
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{{#set: gene associated=Ec-03_003520}}
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{{#set: common name=Esi_0476_0015|Esi0476_0015}}
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{{#set: in pathway=PWY-5063}}
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{{#set: reaction associated=GLUTAMATE-N-ACETYLTRANSFERASE-RXN|N-ACETYLTRANSFER-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-5154|GLUTORN-PWY|ARGSYNBSUB-PWY}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:09, 21 March 2018

Gene Ec-07_005560

  • left end position:
    • 5410697
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5422566
  • centisome position:
    • 70.0647
  • Synonym(s):
    • Esi_0476_0015
    • Esi0476_0015

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_005560&oldid=24961"