Difference between revisions of "Ec-10 006240"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
(Created page with "Category:Gene == Gene Ec-10_006240 == * left end position: ** 6283004 * transcription direction: ** POSITIVE * right end position: ** 6291692 * centisome position: ** 96.6...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
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== Gene Ec-10_006240 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6283004
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* common name:
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* transcription direction:
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** peptide-aspartate beta-dioxygenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
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** 6291692
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* centisome position:
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** 96.64695   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0006_0200
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** Esi0006_0200
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** CYP51C1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.14.13.70-RXN]]
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** 1 [[Protein-L-Aspartates]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a [protein]-L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 a [protein]-3-hydroxy-L-aspartate[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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* Reaction: [[1.14.13.79-RXN]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-1121]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-24_001390]]
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* Reaction: [[RXN-11881]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** Assignment: ec-number
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* [[Ec-14_006050]]
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* Reaction: [[RXN-13707]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** Assignment: ec-number
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* [[Ec-06_006420]]
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* Reaction: [[RXN-13961]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** Assignment: ec-number
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* [[Ec-24_000830]]
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* Reaction: [[RXN-3661]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***GO-TERM
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* Reaction: [[RXN-4225]]
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== Pathways  ==
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** Source: [[orthology-aragem]]
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== Reconstruction information  ==
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* Reaction: [[RXN-4231]]
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* Category: [[annotation]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-715]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-773]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-8038]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-8040]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-147]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-148]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-150]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-151]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-160]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-161]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN3O-130]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-11]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-12]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-13]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-303]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-304]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-305]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY66-341]]
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* [[PWY-2541]]
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* [[PWY-699]]
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* [[PWY-7591]]
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* [[PWY-6074]]
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* [[PWY-2181]]
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* [[PWY-2582]]
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* [[PWY-5034]]
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* [[PWY-5947]]
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* [[PWY-5047]]
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* [[PWY66-3]]
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* [[PWY66-4]]
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* [[PWY-5640]]
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* [[PWY-5946]]
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* [[PWY-5943]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6283004}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6291692}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
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{{#set: centisome position=96.64695    }}
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* UNIPROT:
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{{#set: common name=Esi_0006_0200|Esi0006_0200|CYP51C1}}
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** [http://www.uniprot.org/uniprot/Q28056 Q28056]
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{{#set: reaction associated=1.14.13.70-RXN|1.14.13.79-RXN|RXN-1121|RXN-11881|RXN-13707|RXN-13961|RXN-3661|RXN-4225|RXN-4231|RXN-715|RXN-773|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151|RXN1F-160|RXN1F-161|RXN3O-130|RXN66-11|RXN66-12|RXN66-13|RXN66-303|RXN66-304|RXN66-305|UNSPECIFIC-MONOOXYGENASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q93178 Q93178]
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{{#set: pathway associated=PWY66-341|PWY-2541|PWY-699|PWY-7591|PWY-6074|PWY-2181|PWY-2582|PWY-5034|PWY-5947|PWY-5047|PWY66-3|PWY66-4|PWY-5640|PWY-5946|PWY-5943}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=peptide-aspartate beta-dioxygenase}}
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{{#set: ec number=EC-1.14.11.16}}
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{{#set: gene associated=Ec-24_001390|Ec-14_006050|Ec-06_006420|Ec-24_000830}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:11, 21 March 2018

Gene Ec-10_006240

  • left end position:
    • 6283004
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6291692
  • centisome position:
    • 96.64695
  • Synonym(s):
    • Esi_0006_0200
    • Esi0006_0200
    • CYP51C1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_006240&oldid=25105"