Difference between revisions of "RXN0-2601"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12540 RXN-12540] == * direction: ** LEFT-TO-RIGHT * common name: ** Fenton reaction * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] == * direction: ** LEFT-TO-RIGHT * common name: ** DNA glycosylase ** DNA-(apu...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12540 RXN-12540] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Fenton reaction
+
** DNA glycosylase
 +
** DNA-(apurinic or apyrimidinic site) lyase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.99.18 EC-4.2.99.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FE+2]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 1 [[FE+3]][c] '''+''' 1 [[CPD-12377]][c] '''+''' 1 [[OH]][c]
+
** 1 [[Damaged-DNA-Pyrimidine]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 Fe2+[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 1 Fe3+[c] '''+''' 1 hydroxyl radical[c] '''+''' 1 OH-[c]
+
** 1 a damaged DNA pyrimidine[c] '''=>''' 1 a DNA containing an apyrimidinic site[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-16_004990]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-19_001460]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-01_006350]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-00_001490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-18_003720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6854]], ethylene biosynthesis III (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Fenton reaction}}
+
{{#set: common name=DNA glycosylase}}
−
{{#set: in pathway=DETOX1-PWY-1|PWY-6854}}
+
{{#set: common name=DNA-(apurinic or apyrimidinic site) lyase}}
 +
{{#set: ec number=EC-4.2.99.18}}
 +
{{#set: gene associated=Ec-16_004990|Ec-19_001460|Ec-01_006350|Ec-00_001490|Ec-18_003720}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction RXN0-2601

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DNA glycosylase
    • DNA-(apurinic or apyrimidinic site) lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-2601&oldid=25122"