Difference between revisions of "RXN-16389"

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(Created page with "Category:Gene == Gene Ec-15_000020 == * left end position: ** 30505 * transcription direction: ** POSITIVE * right end position: ** 34716 * centisome position: ** 0.565090...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthet...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-15_000020 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] ==
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* left end position:
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* direction:
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** 30505
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** long chain acyl-coA synthetase
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* right end position:
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** long chain acyl-CoA synthetase
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** 34716
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 0.56509024   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0012_0192
 
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** Esi0012_0192
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-12086]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[16-HYDROXYPALMITATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17621]][c] '''+''' 1 [[AMP]][c]
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***go-term
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* With common name(s):
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* [[RXN-12579]]
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** 1 16-hydroxypalmitate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 16-hydroxypalmitoyl-CoA[c] '''+''' 1 AMP[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-12_008720]]
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***go-term
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways associated ==
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[LIPAS-PWY]]
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* Gene: [[Ec-01_001560]]
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* [[PWY-6857]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
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** '''1''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''4''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''6''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=30505}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: right end position=34716}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: centisome position=0.56509024    }}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Esi_0012_0192|Esi0012_0192}}
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{{#set: gene associated=Ec-12_008720|Ec-01_001560|Ec-02_006430|Ec-03_003710}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: in pathway=PWY-321|PWY-6733|PWY-1121}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction RXN-16389

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 16-hydroxypalmitate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 diphosphate[c] + 1 16-hydroxypalmitoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-321, cutin biosynthesis: PWY-321
    • 1 reactions found over 16 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 4 reactions found over 18 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16389&oldid=25137"