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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNAs-with-queuine tRNAs-with-queuine] == |
| − | * direction: | + | * common name: |
| − | ** REVERSIBLE | + | ** a queuosine34 in tRNA |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/1.2.1.8 EC-1.2.1.8]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** a tRNA containing queuosine |
| | + | ** queuosine at position 34 of a tRNA |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c]
| + | == Reaction(s) of unknown directionality == |
| − | * With common name(s):
| + | * [[QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN]] |
| − | ** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 betaine aldehyde[c] '''<=>''' 2 H+[c] '''+''' 1 glycine betaine[c] '''+''' 1 NADH[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Ec-20_003790]]
| + | |
| − | ** [[pantograph]]-[[aragem]]
| + | |
| − | == Pathways == | + | |
| − | * [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
| + | |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
| + | |
| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3722 PWY-3722]
| + | |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway
| + | |
| − | * [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
| + | |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494] | + | |
| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-aragem]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a queuosine34 in tRNA}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
| + | {{#set: common name=a tRNA containing queuosine|queuosine at position 34 of a tRNA}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
| + | {{#set: reversible reaction associated=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P17202 P17202]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P17445 P17445]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P28237 P28237]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P42757 P42757]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q40024 Q40024]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O24174 O24174]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43828 Q43828]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43829 Q43829]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O22477 O22477]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: ec number=EC-1.2.1.8}} | + | |
| − | {{#set: gene associated=Ec-20_003790}} | + | |
| − | {{#set: in pathway=BETSYN-PWY|CHOLINE-BETAINE-ANA-PWY|PWY-3722|PWY1F-353|PWY-7494}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction source=orthology-aragem}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
