Difference between revisions of "Ec-26 004170"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoenol...")
 
(Created page with "Category:Gene == Gene Ec-26_004170 == * left end position: ** 4400253 * transcription direction: ** POSITIVE * right end position: ** 4411255 * centisome position: ** 66.8...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
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== Gene Ec-26_004170 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4400253
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* common name:
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* transcription direction:
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** phosphoenolpyruvate carboxykinase (ATP)
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
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** 4411255
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* centisome position:
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** 66.839134   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0349_0012
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** Esi0349_0012
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPDEPHOS-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 ATP[c] '''+''' 1 oxaloacetate[c] '''=>''' 1 ADP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 CO2[c]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-14117]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-19_002930]]
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*** Assignment: go-term
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-14192]]
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***GO-TERM
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** Source: [[annotation-esiliculosus_genome]]
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** [[pantograph]]-[[aragem]]
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*** Assignment: go-term
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== Pathways ==
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* Reaction: [[RXN-14207]]
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
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** Source: [[annotation-esiliculosus_genome]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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*** Assignment: go-term
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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== Pathways associated ==
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-1042]]
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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* [[P341-PWY]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-2221]]
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== Reconstruction information  ==
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* [[GLYCOLYSIS]]
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* [[orthology]]:
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* [[NPGLUCAT-PWY]]
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** [[pantograph]]:
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* [[PWY-7218]]
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*** [[aragem]]
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* [[PWY-7383]]
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* [[annotation]]:
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* [[P124-PWY]]
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** [[pathwaytools]]:
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* [[PWY-6886]]
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*** [[esiliculosus_genome]]
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* [[PWY-5723]]
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* [[FERMENTATION-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[PWY-6901]]
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* [[PWY-6142]]
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* [[P122-PWY]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4400253}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4411255}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
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{{#set: centisome position=66.839134    }}
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* UNIPROT:
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{{#set: common name=Esi_0349_0012|Esi0349_0012}}
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** [http://www.uniprot.org/uniprot/P10963 P10963]
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{{#set: reaction associated=PEPDEPHOS-RXN|RXN-14117|RXN-14192|RXN-14207}}
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** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|GLYCOLYSIS|NPGLUCAT-PWY|PWY-7218|PWY-7383|P124-PWY|PWY-6886|PWY-5723|FERMENTATION-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-6901|PWY-6142|P122-PWY|PWY-7003}}
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** [http://www.uniprot.org/uniprot/P43923 P43923]
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** [http://www.uniprot.org/uniprot/P22259 P22259]
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** [http://www.uniprot.org/uniprot/P42066 P42066]
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** [http://www.uniprot.org/uniprot/P49292 P49292]
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** [http://www.uniprot.org/uniprot/O49547 O49547]
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** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
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** [http://www.uniprot.org/uniprot/Q39294 Q39294]
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** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoenolpyruvate carboxykinase (ATP)}}
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{{#set: ec number=EC-4.1.1.49}}
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{{#set: gene associated=Ec-19_002930}}
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{{#set: in pathway=PWY-561|GLUCONEO-PWY|PWY-7117}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:11, 21 March 2018

Gene Ec-26_004170

  • left end position:
    • 4400253
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4411255
  • centisome position:
    • 66.839134
  • Synonym(s):
    • Esi_0349_0012
    • Esi0349_0012

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_004170&oldid=25195"