Difference between revisions of "Ec-07 000310"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.8-RXN 3.2.1.8-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Endo-1,4-beta-xylanase,...")
 
(Created page with "Category:Gene == Gene Ec-07_000310 == * left end position: ** 334957 * transcription direction: ** NEGATIVE * right end position: ** 344208 * centisome position: ** 4.3374...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.8-RXN 3.2.1.8-RXN] ==
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== Gene Ec-07_000310 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 334957
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* common name:
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* transcription direction:
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** Endo-1,4-beta-xylanase, family GH10
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.2.1.8 EC-3.2.1.8]
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** 344208
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* centisome position:
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** 4.337456   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0057_0078
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** Esi0057_0078
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** n [[WATER]][c] '''+''' 1 [[1-4-beta-Xylan]][c] '''=>''' n [[1-4-D-xylooligosaccharides]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** n H2O[c] '''+''' 1 a (1→4)-β-D-xylan[c] '''=>''' n a (1->4)-β-D-xylan oligosaccharide[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_005310]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6784]], cellulose and hemicellulose degradation (cellulolosome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6784 PWY-6784]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=334957}}
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** [http://www.uniprot.org/uniprot/P10478 P10478]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/Q9R5M7 Q9R5M7]
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{{#set: right end position=344208}}
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** [http://www.uniprot.org/uniprot/Q7M519 Q7M519]
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{{#set: centisome position=4.337456    }}
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** [http://www.uniprot.org/uniprot/Q7M520 Q7M520]
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{{#set: common name=Esi_0057_0078|Esi0057_0078}}
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** [http://www.uniprot.org/uniprot/P35809 P35809]
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.uniprot.org/uniprot/Q7M513 Q7M513]
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** [http://www.uniprot.org/uniprot/Q7M0W8 Q7M0W8]
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** [http://www.uniprot.org/uniprot/P23556 P23556]
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** [http://www.uniprot.org/uniprot/Q7M4V8 Q7M4V8]
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** [http://www.uniprot.org/uniprot/Q9R5M6 Q9R5M6]
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** [http://www.uniprot.org/uniprot/Q7M0X0 Q7M0X0]
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** [http://www.uniprot.org/uniprot/Q7M0W9 Q7M0W9]
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** [http://www.uniprot.org/uniprot/P45703 P45703]
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** [http://www.uniprot.org/uniprot/P18429 P18429]
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** [http://www.uniprot.org/uniprot/P40943 P40943]
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** [http://www.uniprot.org/uniprot/P54865 P54865]
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** [http://www.uniprot.org/uniprot/Q00177 Q00177]
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** [http://www.uniprot.org/uniprot/P79046 P79046]
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** [http://www.uniprot.org/uniprot/O83007 O83007]
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** [http://www.uniprot.org/uniprot/Q9UUQ2 Q9UUQ2]
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** [http://www.uniprot.org/uniprot/Q9HFA4 Q9HFA4]
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** [http://www.uniprot.org/uniprot/Q9F1V3 Q9F1V3]
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** [http://www.uniprot.org/uniprot/Q9AJR9 Q9AJR9]
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** [http://www.uniprot.org/uniprot/P29417 P29417]
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** [http://www.uniprot.org/uniprot/P26514 P26514]
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** [http://www.uniprot.org/uniprot/P26220 P26220]
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** [http://www.uniprot.org/uniprot/Q9R5P8 Q9R5P8]
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** [http://www.uniprot.org/uniprot/Q9R5P9 Q9R5P9]
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** [http://www.uniprot.org/uniprot/P09850 P09850]
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** [http://www.uniprot.org/uniprot/P14768 P14768]
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** [http://www.uniprot.org/uniprot/P45796 P45796]
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** [http://www.uniprot.org/uniprot/P29126 P29126]
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** [http://www.uniprot.org/uniprot/P29127 P29127]
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** [http://www.uniprot.org/uniprot/Q02244 Q02244]
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** [http://www.uniprot.org/uniprot/P40944 P40944]
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** [http://www.uniprot.org/uniprot/P55334 P55334]
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** [http://www.uniprot.org/uniprot/Q56013 Q56013]
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** [http://www.uniprot.org/uniprot/Q59256 Q59256]
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** [http://www.uniprot.org/uniprot/P55328 P55328]
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** [http://www.uniprot.org/uniprot/Q01426 Q01426]
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** [http://www.uniprot.org/uniprot/P55331 P55331]
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** [http://www.uniprot.org/uniprot/Q59257 Q59257]
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** [http://www.uniprot.org/uniprot/P51584 P51584]
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** [http://www.uniprot.org/uniprot/P49942 P49942]
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** [http://www.uniprot.org/uniprot/P55333 P55333]
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** [http://www.uniprot.org/uniprot/P55332 P55332]
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** [http://www.uniprot.org/uniprot/Q59790 Q59790]
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** [http://www.uniprot.org/uniprot/Q59300 Q59300]
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** [http://www.uniprot.org/uniprot/Q59301 Q59301]
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** [http://www.uniprot.org/uniprot/Q59674 Q59674]
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** [http://www.uniprot.org/uniprot/Q59675 Q59675]
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** [http://www.uniprot.org/uniprot/Q60037 Q60037]
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** [http://www.uniprot.org/uniprot/Q12579 Q12579]
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** [http://www.uniprot.org/uniprot/Q12580 Q12580]
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** [http://www.uniprot.org/uniprot/Q60046 Q60046]
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** [http://www.uniprot.org/uniprot/P93185 P93185]
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** [http://www.uniprot.org/uniprot/P93186 P93186]
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** [http://www.uniprot.org/uniprot/P93187 P93187]
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** [http://www.uniprot.org/uniprot/Q12603 Q12603]
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** [http://www.uniprot.org/uniprot/O69230 O69230]
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** [http://www.uniprot.org/uniprot/O30426 O30426]
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** [http://www.uniprot.org/uniprot/O52373 O52373]
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** [http://www.uniprot.org/uniprot/Q59278 Q59278]
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** [http://www.uniprot.org/uniprot/Q9RKN6 Q9RKN6]
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** [http://www.uniprot.org/uniprot/P00694 P00694]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Endo-1,4-beta-xylanase, family GH10}}
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{{#set: ec number=EC-3.2.1.8}}
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{{#set: gene associated=Ec-07_005310}}
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{{#set: in pathway=PWY-6784}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:11, 21 March 2018

Gene Ec-07_000310

  • left end position:
    • 334957
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 344208
  • centisome position:
    • 4.337456
  • Synonym(s):
    • Esi_0057_0078
    • Esi0057_0078

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_000310&oldid=25206"