Difference between revisions of "Ec-24 003910"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16041 RXN-16041] == * direction: ** LEFT-TO-RIGHT * common name: ** Lyso-phosphatidylcholine ac...")
 
(Created page with "Category:Gene == Gene Ec-24_003910 == * left end position: ** 4284830 * transcription direction: ** POSITIVE * right end position: ** 4292393 * centisome position: ** 85.9...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16041 RXN-16041] ==
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== Gene Ec-24_003910 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4284830
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* common name:
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* transcription direction:
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** Lyso-phosphatidylcholine acyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1.23 EC-2.3.1.23]
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** 4292393
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* centisome position:
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** 85.90842   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0109_0085
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** Esi0109_0085
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-17278]][c] '''=>''' 1 [[CPD-14392]][c] '''+''' 1 [[Glycerolipids]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 coenzyme A[c] '''+''' 1 a [glycerolipid]-stearidonate[c] '''=>''' 1 stearidonoyl-CoA[c] '''+''' 1 a glycerolipid[c]
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* Reaction: [[GPPSYN-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-9003]]
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* [[Ec-16_002160]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-9384]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* Reaction: [[RXN0-5180]]
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* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
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** Source: [[orthology-aragem]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Pathways associated ==
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== Reconstruction information  ==
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* [[PWY-7736]]
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* [[annotation]]:
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* [[PWY-7410]]
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** [[pathwaytools]]:
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* [[PWY-6859]]
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*** [[esiliculosus_genome]]
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* [[PWY-7709]]
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* [[PWY-6383]]
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* [[PWY-7235]]
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* [[PWY-7182]]
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* [[PWY-6708]]
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* [[PWY-7141]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-7102]]
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* [[PWY-7659]]
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* [[PWY-5870]]
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* [[PWY3O-19]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4284830}}
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{{#set: common name=Lyso-phosphatidylcholine acyltransferase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.3.1.23}}
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{{#set: right end position=4292393}}
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{{#set: gene associated=Ec-16_002160}}
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{{#set: centisome position=85.90842    }}
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{{#set: in pathway=PWY-6958}}
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{{#set: common name=Esi_0109_0085|Esi0109_0085}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN|GPPSYN-RXN|RXN-9003|RXN-9384|RXN0-5180}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY-7736|PWY-7410|PWY-6859|PWY-7709|PWY-6383|PWY-7235|PWY-7182|PWY-6708|PWY-7141|PWY-5123|PWY-5122|PWY-7102|PWY-7659|PWY-5870|PWY3O-19}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:12, 21 March 2018

Gene Ec-24_003910

  • left end position:
    • 4284830
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4292393
  • centisome position:
    • 85.90842
  • Synonym(s):
    • Esi_0109_0085
    • Esi0109_0085

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_003910&oldid=25222"