Difference between revisions of "PWY-1622"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** reductive TCA cycle II
+
** formaldehyde assimilation I (serine pathway)
 
* Synonym(s):
 
* Synonym(s):
−
** reductive tricarboxylic acid cycle
 
−
** reductive tricarboxylic acid pathway
 
−
** reductive citric acid cycle
 
−
** reverse citric acid cycle
 
−
** carbon fixation
 
−
** CO2 fixation
 
−
** reductive carboxylic acid cycle
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''6''' reactions found over '''12''' reactions in the full pathway
+
  '''6''' reactions found over '''13''' reactions in the full pathway
−
* [[ACONITATEDEHYDR-RXN]]
+
* [[2PGADEHYDRAT-RXN]]
−
** 2 associated gene(s):
+
** 3 associated gene(s):
−
*** [[Ec-16_001000]]
+
*** [[Ec-14_005400]]
−
*** [[Ec-12_000170]]
+
*** [[Ec-27_004000]]
−
** 1 reconstruction source(s) associated:
+
*** [[Ec-26_004120]]
 +
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[ACONITATEHYDR-RXN]]
+
*** [[orthology-aragem]]
 +
* [[GLYOHMETRANS-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-12_000170]]
+
*** [[Ec-14_004260]]
−
*** [[Ec-16_001000]]
+
*** [[Ec-24_002640]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[FUMHYDR-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Ec-23_003460]]
 
−
*** [[Ec-25_001360]]
 
−
** 2 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
*** [[orthology-aragem]]
 
 
* [[MALATE-DEH-RXN]]
 
* [[MALATE-DEH-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
Line 42: Line 30:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[PYRUFLAVREDUCT-RXN]]
+
* [[PEPCARBOX-RXN]]
−
** 3 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Ec-23_002710]]
+
*** [[Ec-28_003470]]
−
*** [[Ec-15_004230]]
+
−
*** [[Ec-18_003420]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[SUCCCOASYN-RXN]]
+
* [[RXN-15513]]
−
** 2 associated gene(s):
+
** 0 associated gene:
−
*** [[Ec-10_000030]]
+
** 1 reconstruction source(s) associated:
−
*** [[Ec-02_001020]]
+
*** [[annotation-esiliculosus_genome]]
−
** 2 reconstruction source(s) associated:
+
* [[RXN-2881]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=GKI-RXN GKI-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=CITRATE--COA-LIGASE-RXN CITRATE--COA-LIGASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRUVATE-REDUCTASE-RXN HYDROXYPYRUVATE-REDUCTASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=R23-RXN R23-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALATE--COA-LIGASE-RXN MALATE--COA-LIGASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7929 RXN-7929]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8457 RXN-8457]
+
* [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-200783}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=reductive TCA cycle II}}
+
{{#set: common name=formaldehyde assimilation I (serine pathway)}}
−
{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
+
 
{{#set: reaction found=6}}
 
{{#set: reaction found=6}}
−
{{#set: total reaction=12}}
+
{{#set: total reaction=13}}
−
{{#set: completion rate=50.0}}
+
{{#set: completion rate=46.0}}

Latest revision as of 19:12, 21 March 2018

Pathway PWY-1622

  • taxonomic range:
  • common name:
    • formaldehyde assimilation I (serine pathway)
  • Synonym(s):

Reaction(s) found

6 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-1622&oldid=25225"