Difference between revisions of "R222-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] == * direction: ** R...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R222-RXN R222-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-octanal dehydrogenase (NAD+...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R222-RXN R222-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Thiolase-like, subgroup
+
** 1-octanal dehydrogenase (NAD+)
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** Hydroxymethylglutaryl-CoA synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.3.10 EC-2.3.3.10]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-371]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CPD-195]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 acetoacetyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''+''' 1 coenzyme A[c]
+
** 1 NAD+[c] '''+''' 1 1-octanal[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 1 octanoate[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-19_002030]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-21_004360]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
+
* [[P221-PWY]], octane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
+
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7571]], ferrichrome A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7571 PWY-7571]
+
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10188 10188]
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{{#set: common name=1-octanal dehydrogenase (NAD+)}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-1.2.1.3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
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{{#set: in pathway=P221-PWY}}
−
* UNIPROT:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P13704 P13704]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
** [http://www.uniprot.org/uniprot/P22791 P22791]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P54870 P54870]
+
−
** [http://www.uniprot.org/uniprot/P54869 P54869]
+
−
** [http://www.uniprot.org/uniprot/O51626 O51626]
+
−
** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
+
−
** [http://www.uniprot.org/uniprot/P17425 P17425]
+
−
** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
+
−
** [http://www.uniprot.org/uniprot/Q01581 Q01581]
+
−
** [http://www.uniprot.org/uniprot/P54961 P54961]
+
−
** [http://www.uniprot.org/uniprot/P54839 P54839]
+
−
** [http://www.uniprot.org/uniprot/P54874 P54874]
+
−
** [http://www.uniprot.org/uniprot/P54868 P54868]
+
−
** [http://www.uniprot.org/uniprot/P54873 P54873]
+
−
** [http://www.uniprot.org/uniprot/P93773 P93773]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Thiolase-like, subgroup}}
+
−
{{#set: common name=Hydroxymethylglutaryl-CoA synthase}}
+
−
{{#set: ec number=EC-2.3.3.10}}
+
−
{{#set: gene associated=Ec-19_002030|Ec-21_004360}}
+
−
{{#set: in pathway=PWY66-367|PWY-6174|PWY-922|PWY-7391|PWY-7571|PWY-7524}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:12, 21 March 2018

Reaction R222-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1-octanal dehydrogenase (NAD+)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 1-octanal[c] + 1 H2O[c] => 2 H+[c] + 1 octanoate[c] + 1 NADH[c]

Genes associated with this reaction

Pathways

  • P221-PWY, octane oxidation: P221-PWY
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=R222-RXN&oldid=25228"