Difference between revisions of "Ec-06 010830"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2.1...")
(Created page with "Category:Gene == Gene Ec-06_010830 == * left end position: ** 8449784 * transcription direction: ** NEGATIVE * right end position: ** 8454323 * centisome position: ** 96.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] ==
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== Gene Ec-06_010830 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 8449784
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.8 EC-1.2.1.8]
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** NEGATIVE
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* right end position:
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** 8454323
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* centisome position:
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** 96.48341   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0186_0010
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** Esi0186_0010
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[BTUR2-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 betaine aldehyde[c] '''<=>''' 2 H+[c] '''+''' 1 glycine betaine[c] '''+''' 1 NADH[c]
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* Reaction: [[COBALADENOSYLTRANS-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[R344-RXN]]
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* Gene: [[Ec-20_003790]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: go-term
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== Pathways  ==
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== Pathways associated ==
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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* [[COBALSYN-PWY]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6269]]
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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* [[PWY-6268]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5509]]
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* [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494]
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* [[PWY-5508]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3722 PWY-3722]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=8449784}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
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{{#set: right end position=8454323}}
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* LIGAND-RXN:
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{{#set: centisome position=96.48341    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
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{{#set: common name=Esi_0186_0010|Esi0186_0010}}
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* UNIPROT:
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{{#set: reaction associated=BTUR2-RXN|COBALADENOSYLTRANS-RXN|R344-RXN}}
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** [http://www.uniprot.org/uniprot/P17202 P17202]
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{{#set: pathway associated=COBALSYN-PWY|PWY-6269|PWY-6268|PWY-5509|PWY-5508}}
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** [http://www.uniprot.org/uniprot/P17445 P17445]
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** [http://www.uniprot.org/uniprot/P28237 P28237]
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** [http://www.uniprot.org/uniprot/P42757 P42757]
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** [http://www.uniprot.org/uniprot/Q40024 Q40024]
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** [http://www.uniprot.org/uniprot/O24174 O24174]
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** [http://www.uniprot.org/uniprot/Q43828 Q43828]
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** [http://www.uniprot.org/uniprot/Q43829 Q43829]
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** [http://www.uniprot.org/uniprot/O22477 O22477]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.2.1.8}}
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{{#set: gene associated=Ec-20_003790}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY|PWY-7494|PWY1F-353|PWY-3722}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:12, 21 March 2018

Gene Ec-06_010830

  • left end position:
    • 8449784
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 8454323
  • centisome position:
    • 96.48341
  • Synonym(s):
    • Esi_0186_0010
    • Esi0186_0010

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_010830&oldid=25264"